Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq17 196 4e-45 seq24 172 4e-38 seq5 140 3e-28 seq14 84.2 2e-11 >seq17 Length=290845 Score = 196 bits (216), Expect = 4e-45 Identities = 627/963 (65%), Gaps = 15/963 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||||| || || | ||| || |||||| | || || || | | ||||||||| Sbjct 196160 GGTAGGGCAATGGAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACTCGACG 196101 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 |||||| |||||||| | || || ||||| || || || || |||| | Sbjct 196100 ATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCTTTCTG 196041 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 || || || || ||||| | |||| | || || ||||| || ||| | | | |||| Sbjct 196040 TTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTGCTTGTAAGATG 195981 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 |||| ||| | | ||||| | || |||| | ||||| | ||||||| | Sbjct 195980 GCGTACCACACTTTTTGGGCCTTGATGGTTT-TACCACG--ACCTTCTCTTTCGTAACGG 195924 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGAC----ACTTGTG 66297 ||| || | |||||| ||||||||| || ||| || || ||| ||||| | Sbjct 195923 GTGTATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGAACTTG-G 195865 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 || | | | | | ||| | ||||||| ||| ||||| ||| || |||||||| || Sbjct 195864 TGAAAATA---GGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGGAAT 195808 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| ||||| ||| | ||| | ||| || || || | || ||| |||| | | Sbjct 195807 CCATAGGGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGAT 195748 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 || | || || |||||||| ||||||||||| |||| | | | ||| || | || Sbjct 195747 ATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGG 195688 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 | ||| ||||||||||| ||||| || || || ||||||||||| | ||| || Sbjct 195687 TCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTATTGAAGACACGGATCATGGG 195628 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 | | ||| || || | || ||||| || | || || ||| | || |||| Sbjct 195627 AATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATT 195568 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 || | || ||||||| |||||| || ||||| || || ||||| || || || Sbjct 195567 GTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGT 195508 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || || || |||||||| |||| |||| | ||| | || ||| | ||| Sbjct 195507 GTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTG 195448 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA-G 66776 || | || || |||| || || ||||| | |||||| || |||| || | | | Sbjct 195447 AGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAGT-ATCTCAATG 195389 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CA 66835 |||| | ||||| |||| | || | || |||| || || || || || | || Sbjct 195388 ACATCAAGTTGTAAGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAGGGCCA 195329 Query 66836 CATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAG 66895 || ||||| | || | ||| || |||||| ||| | | | | | |||||| Sbjct 195328 CA-CGCATGACCAGATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAAGTAG 195270 Query 66896 GAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATG 66955 || ||||||| ||||||| || || || | ||| |||||||| | | | ||||||| Sbjct 195269 GAACGTTCCAAAGTCTTGAACCCGAAATAGGTGTACTTGAAATCTCTGTCGTACACGATG 195210 Query 66956 GCC 66958 ||| Sbjct 195209 GCC 195207 >seq24 Length=351367 Score = 172 bits (190), Expect = 4e-38 Identities = 401/593 (68%), Gaps = 14/593 (2%) Strand=Plus/Plus Query 61059 CGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTC 61118 ||| |||||||||||| |||| | || || |||| |||||| || || || || Sbjct 16785 CGTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTC 16844 Query 61119 CTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATC 61178 ||||||||| | ||||| |||| |||||||| ||||| | |||||| | | Sbjct 16845 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAAT 16904 Query 61179 GAGCGGTGAAC--AACATT--TCAT-TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || || ||| || ||| |||| | | | ||| | || ||||| ||||| || ||| Sbjct 16905 GAACGAA-AACGAAAGATTCTTCATCTCCAGA-GTGCTTGCCTTCTTCGCCGCCTCCGAC 16962 Query 61234 GGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCG 61293 ||||||||||| || || || | || ||| | ||||| || | ||||||| Sbjct 16963 GGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAGGCC 17022 Query 61294 CGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTT 61353 |||||||||| |||||||| || || ||||| ||||||| || | ||| | Sbjct 17023 AAGAGTTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCCTTG 17082 Query 61354 CTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAG 61413 | ||||| || ||||||| ||| | |||| | || |||||||| |||||||| Sbjct 17083 TTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGAC 17142 Query 61414 ACGATACCGGCGGTGAAGCG-GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAAC 61472 || || || | | ||| ||| || || |||||| | | ||||| |||| || | Sbjct 17143 ACCATCCCAGAAAT-CTGCGAGAAGGCCGAATGGGCCCTTAGATGGAT--CCAGGACGCC 17199 Query 61473 G--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGT 61530 | || || |||||| || || | || || || |||| ||||| || ||| Sbjct 17200 GATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCC 17259 Query 61531 GGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTC 61590 || || || ||| | ||||| |||||||||||| | || | ||||||||| |||||||| Sbjct 17260 GGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTC 17319 Query 61591 AGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG-CTGTTT 61642 ||| || |||| | | ||||| || |||| || |||| |||||| Sbjct 17320 TCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTT 17372 >seq5 Length=188055 Score = 140 bits (154), Expect = 3e-28 Identities = 389/597 (65%), Gaps = 0/597 (0%) Strand=Plus/Minus Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| ||||| ||| || ||||| || | ||| || || ||| | ||| | || || Sbjct 51855 TTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACG 51796 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 || || | |||||||| || | | ||||| ||| || ||||| || || ||||| Sbjct 51795 GATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCA 51736 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||| |||| || | || || | || | ||| ||||| ||||| || || || Sbjct 51735 TGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACG 51676 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || |||||||||||||| | ||| || | | ||||||||| | || || || || Sbjct 51675 GGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACC 51616 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||| || || ||| || || | ||||| || |||||||||||||| || || Sbjct 51615 AGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGT 51556 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 || || || |||||| || || || | | || || |||||||| ||| |||| Sbjct 51555 TTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTT 51496 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || | | ||| | || || | ||| || || ||||| | || ||| | || Sbjct 51495 CATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGT 51436 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | ||||| |||||||| | | ||||| | || || || || | | || || Sbjct 51435 TGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTC 51376 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 |||||| || || ||||| || | || || ||| | | || ||| || ||||| | Sbjct 51375 AATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 51316 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || | |||| || |||||| || ||||| | || || | ||| ||||| Sbjct 51315 AACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 51259 >seq14 Length=538356 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 9148 TGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATA 9207 |||||||| |||| || ||||| ||| ||||||||||||| | |||| || || Sbjct 121875 TGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATACAAGACGTGCGATG 121816 Query 9208 CGGACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATATG 9267 |||||||| || ||||| | |||||| || ||| ||| || || || || | Sbjct 121815 ATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATACA-CAAATTAAAAACA 121757 Query 9268 AGCCGAGTAG-TCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATG 9326 | || | | || | || || |||| ||| |||||||| ||||| ||||||||| Sbjct 121756 AACCCTTACGATAGAAGAATTATCATGAGTGCTTGGAATCCTGCAGATTTTGACAAGATG 121697 Query 9327 GTATTGCCGCCATGCCATAT 9346 | || || ||||||||||| Sbjct 121696 GCTTTACCACCATGCCATAT 121677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567757732000