Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq338 405 2e-110 >seq338 Length=6541 Score = 405 bits (448), Expect = 2e-110 Identities = 377/475 (79%), Gaps = 8/475 (2%) Strand=Plus/Minus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 || |||| ||||||||||||| |||| |||||||||||| || ||||||| | Sbjct 6185 AGTGGCGAACGGGTGAGTAACACGTGAGTAACCTGCCCTTGACTTCGGGATAACTCCGGG 6126 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142 ||| |||||||| |||| | | | |||||||| | || |||| | Sbjct 6125 AAACCGGGGCTAATACCGGATATGAGCCGTCC-TCGCATGGGGGTGGTTGGAAAGTTTTT 6067 Query 143 GCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGC 202 |||| |||| | | |||| | || |||| |||||| ||| | ||| ||||||||| Sbjct 6066 -CGGTCAGGGATGGGCTCGCGGCCTATCAGCTTGTTGGTGGGGTGATGGCCTACCAAGGC 6008 Query 203 GACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAA 262 ||||| ||||||| |||||||||| || |||||||| ||| |||||||||||| ||| Sbjct 6007 GACGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTGAGACACGGCCCAG 5948 Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 5947 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGA 5888 Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----T 377 ||||||||||| ||||||||||||||||| ||||| |||| || || |||||| Sbjct 5887 CGCCGCGTGAGGGATGAAGGCCTTCGGGTTGTAAACCTCTTTCAGCAGGGAAGAAGCGCA 5828 Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437 | ||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| Sbjct 5827 AGTGACGGTACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 5768 Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 ||||| || |||||| |||||||||| | |||||||||| | |||||| ||||| Sbjct 5767 TAGGGCGCAAGCGTTGTCCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGTTT 5714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497593305728