Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq338 405 2e-110
>seq338
Length=6541
Score = 405 bits (448), Expect = 2e-110
Identities = 377/475 (79%), Gaps = 8/475 (2%)
Strand=Plus/Minus
Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82
|| |||| ||||||||||||| |||| |||||||||||| || ||||||| |
Sbjct 6185 AGTGGCGAACGGGTGAGTAACACGTGAGTAACCTGCCCTTGACTTCGGGATAACTCCGGG 6126
Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142
||| |||||||| |||| | | | |||||||| | || |||| |
Sbjct 6125 AAACCGGGGCTAATACCGGATATGAGCCGTCC-TCGCATGGGGGTGGTTGGAAAGTTTTT 6067
Query 143 GCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGC 202
|||| |||| | | |||| | || |||| |||||| ||| | ||| |||||||||
Sbjct 6066 -CGGTCAGGGATGGGCTCGCGGCCTATCAGCTTGTTGGTGGGGTGATGGCCTACCAAGGC 6008
Query 203 GACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAA 262
||||| ||||||| |||||||||| || |||||||| ||| |||||||||||| |||
Sbjct 6007 GACGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTGAGACACGGCCCAG 5948
Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 5947 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGA 5888
Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----T 377
||||||||||| ||||||||||||||||| ||||| |||| || || ||||||
Sbjct 5887 CGCCGCGTGAGGGATGAAGGCCTTCGGGTTGTAAACCTCTTTCAGCAGGGAAGAAGCGCA 5828
Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
| ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 5827 AGTGACGGTACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 5768
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492
||||| || |||||| |||||||||| | |||||||||| | |||||| |||||
Sbjct 5767 TAGGGCGCAAGCGTTGTCCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGTTT 5714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497593305728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |