Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq338 163 6e-38
>seq338
Length=6541
Score = 163 bits (180), Expect = 6e-38
Identities = 213/295 (72%), Gaps = 15/295 (5%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||| ||||||||| |||| ||| |||||| || || | |
Sbjct 5779 GGCTGCTGGCACGTAGTTAGCCGGCGCTTCTTCTGCAGGTACCGTCA--CTTGCGC---- 5832
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
|| |||||| | ||||| |||||||| ||| || ||||||||| ||||||
Sbjct 5833 --------TTCTTCCCTGCTGAAAGAGGTTTACAACCCGAAGG-CCTTCATCCCTCACGC 5883
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | |||| |||| || ||| |||||| ||||||||| ||||||||||||||||||
Sbjct 5884 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 5943
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| | | |||||||| | ||| || |
Sbjct 5944 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGT 6003
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295
||| | || ||| |||| | ||||| || || | || || | ||| ||||||
Sbjct 6004 CGTCGCCTTGGTAGGCCATCACCCCACCAACAAGCTGATAGGCCGCGAGCCCATC 6058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068795222464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |