Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq57 194 1e-44 seq257 167 2e-36 seq35 140 3e-28 seq190 84.2 2e-11 >seq57 Length=156688 Score = 194 bits (214), Expect = 1e-44 Identities = 631/965 (65%), Gaps = 19/965 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || |||| || || | || || ||||| | || || || | | ||||||||| Sbjct 59096 GGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGGAAGAATACTCGACG 59037 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 |||||| |||| || || | | ||||| |||| |||||||| || |||| | Sbjct 59036 ATTTCGCAACACAAGTT--TGACGATTTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTC 58979 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 || || |||||||| || | |||| | || || ||||| || ||| | | | || Sbjct 58978 TGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGA 58919 Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAAT 66239 |||||| ||| | | ||||| | || |||| | ||||| | ||||||| Sbjct 58918 TGGCGTACCATACCTTTTGAGCCTTGATGGTTT-TACCACG--ACCTTCTCTTTCGTAAC 58862 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA----CACTTG 66295 | || || | |||||| ||||||||| || ||| || || ||| |||||| Sbjct 58861 GGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTG 58802 Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 ||| | | || || | ||| | ||||||| ||| ||||| ||| || ||||| || Sbjct 58801 -GTG-AGA-ATAAG-GTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCGGGA 58746 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGC 66415 ||||| || || ||| | ||| | ||| || || || | || ||| | || | Sbjct 58745 ATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTCTTTCTG 58686 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 | |||| || || |||||||| ||||||||||| |||| | | | ||| || | || Sbjct 58685 ATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCG 58626 Query 66476 ATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATC 66535 | ||| ||||||||||| ||||| || || |||||||||||||| | ||| Sbjct 58625 GGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATG 58566 Query 66536 GGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATA 66595 || | | |||||| || | || ||||| || | || || ||| | || ||| Sbjct 58565 GGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATA 58506 Query 66596 TCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACT 66655 | || | || ||||||| |||||| || ||||| || || ||||| || || Sbjct 58505 TTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAA 58446 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715 || | | || || ||||||||||| |||| |||| | ||| | || ||| | | Sbjct 58445 GTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATT 58386 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 || || | || || |||| || || ||||| | |||||| || |||| || | | Sbjct 58385 TGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGT-ATCTCAA 58327 Query 66776 -GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG- 66833 ||||| | ||||| |||| | || | || || | ||| ||||| || || | Sbjct 58326 CGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGC 58267 Query 66834 CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGT 66893 |||| ||||| | | | ||| || |||||| ||| | | | | | | || Sbjct 58266 CACA-CGCATGACCAAATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAGGT 58208 Query 66894 AGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGA 66953 |||| |||||||| ||||| | ||||| || | ||| |||||||| | | | ||||| Sbjct 58207 AGGAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACTTGAAATCTCTGTCGTACACGA 58148 Query 66954 TGGCC 66958 ||||| Sbjct 58147 TGGCC 58143 >seq257 Length=84383 Score = 167 bits (184), Expect = 2e-36 Identities = 400/593 (67%), Gaps = 14/593 (2%) Strand=Plus/Plus Query 61059 CGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTC 61118 ||| |||||||||||| |||| | || || |||| |||||| || || || || Sbjct 40611 CGTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTC 40670 Query 61119 CTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATC 61178 ||||||||| | ||||| |||| |||||||| ||||| | |||||| | | Sbjct 40671 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAAT 40730 Query 61179 GAGCGGTGAAC--AACATT--TCAT-TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || || ||| || ||| |||| | | | ||| | || ||||| ||||| || ||| Sbjct 40731 GAACGAA-AACGAAAGATTCTTCATCTCCAGA-GTGCTTGCCTTCTTCGCCGCCTCCGAC 40788 Query 61234 GGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCG 61293 ||||||||||| || || || | || ||| | ||||| || | ||||||| Sbjct 40789 GGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAGGCC 40848 Query 61294 CGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTT 61353 |||||||||| |||||||| || || ||||| ||||||| || | ||| | Sbjct 40849 AAGAGTTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCCTTG 40908 Query 61354 CTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAG 61413 | ||||| || ||||||| ||| | |||| | || |||||||| |||||||| Sbjct 40909 TTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGAC 40968 Query 61414 ACGATACCGGCGGTGAAGCG-GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAAC 61472 || || || | | ||| ||| || || |||||| | | ||||| |||| || | Sbjct 40969 ACCATCCCAGAAAT-CTGCGAGAAGGCCGAATGGGCCCTTAGATGGAT--CCAGGACGCC 41025 Query 61473 G--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGT 61530 | || || |||||| || || | || || || |||| ||||| || || Sbjct 41026 GATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCC 41085 Query 61531 GGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTC 61590 || || || ||| | ||||| |||||||||||| | || | ||||||||| |||||||| Sbjct 41086 GGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTC 41145 Query 61591 AGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG-CTGTTT 61642 ||| || |||| | | ||||| || |||| || |||| |||||| Sbjct 41146 TCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTT 41198 >seq35 Length=195003 Score = 140 bits (154), Expect = 3e-28 Identities = 389/597 (65%), Gaps = 0/597 (0%) Strand=Plus/Minus Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| ||||| ||| || ||||| || | ||| || || ||| | ||| | || || Sbjct 50806 TTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACG 50747 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 || || | |||||||| || | | ||||| ||| || ||||| || || ||||| Sbjct 50746 GATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCA 50687 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||| |||| || | || || | || | ||| ||||| ||||| || || || Sbjct 50686 TGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACG 50627 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || |||||||||||||| | ||| || | | ||||||||| | || || || || Sbjct 50626 GGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACC 50567 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||| || || ||| || || | ||||| || |||||||||||||| || || Sbjct 50566 AGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGT 50507 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 || || || |||||| || || || | | || || |||||||| ||| |||| Sbjct 50506 TTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTT 50447 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || | | ||| | || || | ||| || || ||||| | || ||| | || Sbjct 50446 CATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGT 50387 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | ||||| |||||||| | | ||||| | || || || || | | || || Sbjct 50386 TGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTC 50327 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 |||||| || || ||||| || | || || ||| | | || ||| || ||||| | Sbjct 50326 AATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 50267 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || | |||| || |||||| || ||||| | || || | ||| ||||| Sbjct 50266 AACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 50210 >seq190 Length=622597 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 9148 TGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATA 9207 |||||||| |||| || ||||| ||| ||||||||||||| | |||| || || Sbjct 27377 TGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATACAAGACGTGCGATG 27318 Query 9208 CGGACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATATG 9267 |||||||| || ||||| | |||||| || ||| ||| || || || || | Sbjct 27317 ATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATACA-CAAATTAAAAACA 27259 Query 9268 AGCCGAGTAG-TCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATG 9326 | || | | || | || || |||| ||| |||||||| ||||| ||||||||| Sbjct 27258 AACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAGATTTTGACAAGATG 27199 Query 9327 GTATTGCCGCCATGCCATAT 9346 | || || ||||||||||| Sbjct 27198 GCTTTACCACCATGCCATAT 27179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565834124080