Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242715.1_202017-08-07] 54 sequences; 11,543,596 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 192 5e-44 seq27 167 2e-36 seq4 143 2e-29 seq9 84.2 2e-11 >seq5 Length=350035 Score = 192 bits (212), Expect = 5e-44 Identities = 631/967 (65%), Gaps = 23/967 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||||| || || | ||| || |||||| | || || || | | ||||||||| Sbjct 95997 GGTAGGGCAATGGAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACTCGACG 95938 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 |||||| |||||||| | || || ||||| || || || || |||| | Sbjct 95937 ATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCTTTCTG 95878 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 || || || || ||||| | |||| | || || ||||| || ||| | | | |||| Sbjct 95877 TTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTGCTTGTAAGATG 95818 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 |||| ||| | | ||||| | || |||| | ||||| | ||||||| | Sbjct 95817 GCGTACCACACTTTTTGGGCCTTGATGGTTT-TACCACG--ACCTTCTCTTTCGTAACGG 95761 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGAC----ACTTGTG 66297 ||| || | |||||| ||||||||| || ||| || || ||| ||||| | Sbjct 95760 GTGTATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGAACTTG-G 95702 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 || | | | | | ||| | ||||||| ||| ||||| ||| || |||||||| || Sbjct 95701 TGAAAATA---GGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGGAAT 95645 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| ||||| ||| | ||| | ||| || || || | || ||| |||| | | Sbjct 95644 CCATAGGGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGAT 95585 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 || | || || |||||||| ||||||||||| |||| | | | ||| || | || Sbjct 95584 ATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGG 95525 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 | ||| ||||||||||| ||||| || || || ||||| ||||| | ||| || Sbjct 95524 TCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTATTGAATACACGGATCATGGG 95465 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 | | ||| || || | || ||||| || | || || ||| | || |||| Sbjct 95464 AATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATT 95405 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 || | || ||||||| |||||| || ||||| || || ||||| || || || Sbjct 95404 GTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGT 95345 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || || || |||||||| |||| |||| | ||| | || ||| | ||| Sbjct 95344 GTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTG 95285 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA-G 66776 || | || || |||| || || ||||| | |||||| || |||| || | | | Sbjct 95284 AGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAGT-ATCTCAATG 95226 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CA 66835 |||| | ||||| |||| | || | || |||| || || || || || | || Sbjct 95225 ACATCAAGTTGTAAGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAGGGCCA 95166 Query 66836 CATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAA 66891 || ||||| | || | ||| || |||||| ||| |||| || | | | | || Sbjct 95165 CA-CGCATGACCAGATGTTGGGGACGTTCGGCCACTTCGCCG-TC--TAGTCT-TAGCAA 95111 Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCAC 66951 |||||| ||||||| ||||||| || || || | ||| |||||||| | | | ||| Sbjct 95110 GTAGGAACGTTCCAAAGTCTTGAACCCGAAATAGGTGTACTTGAAATCTCTGTCGTACAC 95051 Query 66952 GATGGCC 66958 ||||||| Sbjct 95050 GATGGCC 95044 >seq27 Length=203299 Score = 167 bits (184), Expect = 2e-36 Identities = 400/593 (67%), Gaps = 14/593 (2%) Strand=Plus/Plus Query 61059 CGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTC 61118 ||| |||||||||||| |||| | || || |||| |||||| || || || || Sbjct 141123 CGTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTC 141182 Query 61119 CTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATC 61178 ||||||||| | ||||| |||| |||||||| ||||| | |||||| | | Sbjct 141183 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAAT 141242 Query 61179 GAGCGGTGAAC--AACATT--TCAT-TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || || ||| || ||| |||| | | | ||| | || ||||| ||||| || ||| Sbjct 141243 GAACGAA-AACGAAAGATTCTTCATCTCCAGA-GTGCTTGCCTTCTTCGCCGCCTCCGAC 141300 Query 61234 GGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCG 61293 ||||||||||| || || || | || ||| | ||||| || | ||||||| Sbjct 141301 GGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAGGCC 141360 Query 61294 CGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTT 61353 |||||||||| |||||||| || || ||||| ||||||| || | ||| | Sbjct 141361 AAGAGTTTCTACGGGTTCCAGATCGCAATCGAGAACATCCACTCCGAAACCTACTCCTTG 141420 Query 61354 CTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAG 61413 | ||||| || ||||||| ||| | |||| | || |||||||| |||||||| Sbjct 141421 TTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGAC 141480 Query 61414 ACGATACCGGCGGTGAAGCG-GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAAC 61472 || || || | | ||| ||| || || |||||| | | ||||| |||| || | Sbjct 141481 ACCATCCCAGAAAT-CTGCGAGAAGGCCGAATGGGCCCTTAGATGGAT--CCAGGACGCC 141537 Query 61473 G--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGT 61530 | || || |||||| || || | || || || |||| ||||| || || Sbjct 141538 GATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCC 141597 Query 61531 GGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTC 61590 || || || ||| | ||||| |||||||||||| | || | ||||||||| |||||||| Sbjct 141598 GGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTC 141657 Query 61591 AGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG-CTGTTT 61642 ||| || |||| | | ||||| || |||| || |||| |||||| Sbjct 141658 TCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTT 141710 >seq4 Length=66942 Score = 143 bits (158), Expect = 2e-29 Identities = 390/597 (65%), Gaps = 0/597 (0%) Strand=Plus/Minus Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| ||||| ||| || ||||| || | ||| || || ||| | ||| | || || Sbjct 59851 TTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACG 59792 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 || || | |||||||| || | | ||||| ||| || ||||| || || ||||| Sbjct 59791 GATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCA 59732 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||| |||| || | || || | || | ||| ||||| ||||| || || || Sbjct 59731 TGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACG 59672 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || |||||||||||||| | ||| || | | ||||||||| | || || || || Sbjct 59671 GGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACC 59612 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||| || || ||| || || | ||||| || |||||||||||||| || || Sbjct 59611 AGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGT 59552 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 || || || |||||| || || || | | ||||| |||||||| ||| |||| Sbjct 59551 TTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATGCCTTCAATGGAATCATCCTT 59492 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || | | ||| | || || | ||| || || ||||| | || ||| | || Sbjct 59491 CATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGT 59432 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | ||||| |||||||| | | ||||| | || || || || | | || || Sbjct 59431 TGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTC 59372 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 |||||| || || ||||| || | || || ||| | | || ||| || ||||| | Sbjct 59371 AATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 59312 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || | |||| || |||||| || ||||| | || || | ||| ||||| Sbjct 59311 AACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 59255 >seq9 Length=229753 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 9148 TGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATA 9207 |||||||| |||| || ||||| ||| ||||||||||||| | |||| || || Sbjct 121860 TGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATACAAGACGTGCGATG 121801 Query 9208 CGGACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATATG 9267 |||||||| || ||||| | |||||| || ||| ||| || || || || | Sbjct 121800 ATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATACA-CAAATTAAAAACA 121742 Query 9268 AGCCGAGTAG-TCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATG 9326 | || | | || | || || |||| ||| |||||||| ||||| ||||||||| Sbjct 121741 AACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAGATTTTGACAAGATG 121682 Query 9327 GTATTGCCGCCATGCCATAT 9346 | || || ||||||||||| Sbjct 121681 GCTTTACCACCATGCCATAT 121662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567738350560