Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycetaceae_20sp._20_27Ashbya_20aceri_27_20[genbank_20GCA_5F0 00412225.2_202014-06-05] 8 sequences; 8,894,523 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7 672 0.0 >seq7 Length=1597628 Score = 672 bits (744), Expect = 0.0 Identities = 560/674 (83%), Gaps = 16/674 (2%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 || ||| | | || |||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 406724 CCATGTAAGGTTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTA 406665 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||| Sbjct 406664 AATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAA 406605 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| | Sbjct 406604 AGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGG 406545 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGC 259 | | | ||||| || |||| | || ||| | |||| || | Sbjct 406544 CATTTGATCAGACATGGTGTT--TTGCGGCCCTCGCTCCTTGTG-GGTGGGGTCACCGCA 406488 Query 260 GGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC--CC 314 | ||| |||||||||||| | || || | | ||| || |||||||| | | Sbjct 406487 GTTCACTGGGCCAGCATCAGTTTTGGTGGCAGCAGAAAC-CCTTAGGAATGTGACTTTCT 406429 Query 315 CTTCGGGGG--GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG- 371 |||||| || ||||||||||| ||| || | ||| || ||||||||| | ||| Sbjct 406428 CTTCGGAGGAAGTGTTATAGCCTAAGGTT--ATACTGCCAACCGGGACTGAGGACTGCGG 406371 Query 372 CTCCGGCTA-GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG 430 || |||| | |||||||||| |||||||| | || |||||||||| ||||||||||||| Sbjct 406370 CTTCGGCCAAGGATGCTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAG 406311 Query 431 GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG 490 ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 406310 GAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACG 406251 Query 491 GAGGTGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 ||||| | || | | |||||| |||||||||||||||||||||||||||||||||| Sbjct 406250 TAGGTGAGGGCCTCTTTGAGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTG 406191 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406190 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 406131 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| Sbjct 406130 CAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTT 406071 Query 670 GGGTATAGGGGCGA 683 |||||||||||||| Sbjct 406070 GGGTATAGGGGCGA 406057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999828400