Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycetaceae_20sp._20_27Ashbya_20aceri_27_20[genbank_20GCA_5F0 00412225.2_202014-06-05] 8 sequences; 8,894,523 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 1e-14 >seq6 Length=1334226 Score = 86.0 bits (94), Expect = 1e-14 Identities = 174/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCT-CGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 || ||||||||||||| |||| | |||||||||||| |||||||||| | | || Sbjct 288313 TCCCCGTGGTTGCCCTGCGGC-CCGGTCAGGCCGAACATCCGCTCCTTGAGCAGCTCGTC 288371 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGC 168 |||| ||||||||| ||| | ||||||| | ||| ||||| |||| || Sbjct 288372 GCGCCCGTTCCACATCCCCACGTTCAGGCACACCAGCTGCCGGTTGTCGCTGACGCCGAA 288431 Query 169 CAGGCCGTCCTCGCCCCAACGGTAGGCGCG-GCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | |||||||||||||| ||| | | || || | || || || ||||||| Sbjct 288432 GATCCCGTCCTCGCCCCACCGGAATACCCGCGCATTG-GCCTGTTCGAACGGGAAGTGTC 288490 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||| ||||| || || |||||| || ||||| || |||| ||| ||| || Sbjct 288491 GCCACGCGTCCCCGTCAAACGAGTAGTCCTCCCGCACAGTCGCCCAGCTGCGCTCGGACA 288550 Query 288 GGTAGGGGCCCCA 300 |||| |||||||| Sbjct 288551 GGTACGGGCCCCA 288563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999919360