Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycetaceae_20sp._20_27Ashbya_20aceri_27_20[genbank_20GCA_5F0 00412225.2_202014-06-05] 8 sequences; 8,894,523 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7 199 6e-49 >seq7 Length=1597628 Score = 199 bits (220), Expect = 6e-49 Identities = 223/290 (77%), Gaps = 15/290 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || ||||||||||||||||||||| |||| |||| | Sbjct 403952 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCATT 403895 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 403894 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 403835 Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATA---GGCTT----CG 171 ||||| | |||||| | || |||||| ||| ||||||||||| |||| | Sbjct 403834 GAACGCGATGATTCTTTTTCTCGCACATTATAGATGGATACGAATAAGGTGCTTTTAGCA 403775 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCG-CGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| |||| || || | ||||| | ||| ||| || Sbjct 403774 TCGCTGAACCATAGCAGGCTGGCACTGGTGCTCTTGACGGAAAGGTCTTGGGTGCT-TGC 403716 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| |||||||| ||| ||||| | |||||| |||| | ||||| Sbjct 403715 CGGCGAATTGCAATGTCATACTGCGCGAGAGTAAATCATTTGTATACGAC 403666 Score = 199 bits (220), Expect = 6e-49 Identities = 223/290 (77%), Gaps = 15/290 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || ||||||||||||||||||||| |||| |||| | Sbjct 412131 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCATT 412074 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 412073 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 412014 Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATA---GGCTT----CG 171 ||||| | |||||| | || |||||| ||| ||||||||||| |||| | Sbjct 412013 GAACGCGATGATTCTTTTTCTCGCACATTATAGATGGATACGAATAAGGTGCTTTTAGCA 411954 Query 172 GCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCG-CGGAA--GCGCGGGGCGCTCAGC 228 | | ||||| |||||||| |||| || || | ||||| | ||| ||| || Sbjct 411953 TCGCTGAACCATAGCAGGCTGGCACTGGTGCTCTTGACGGAAAGGTCTTGGGTGCT-TGC 411895 Query 229 TGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| |||||||| ||| ||||| | |||||| |||| | ||||| Sbjct 411894 CGGCGAATTGCAATGTCATACTGCGCGAGAGTAAATCATTTGTATACGAC 411845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199936512