Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 215 4e-51 >seq3 Length=2118207 Score = 215 bits (238), Expect = 4e-51 Identities = 588/892 (66%), Gaps = 20/892 (2%) Strand=Plus/Minus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 ||||||||||| | ||||| ||| |||| | || | |||| |||||||| ||||| Sbjct 1741405 CGTCGTTTCGTTCTCTTCCCAATCAAGTACCACGAAGTCTGGCAAATGTACAAGAAGGCC 1741346 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 ||||| ||||||||||| | || || | || ||| || || | | ||||||| | Sbjct 1741345 GAAGCCTCCTTCTGGACCGCCGAAGAAATTGACTTGAGTAAGGATACCACTGACTGGAAC 1741286 Query 61171 C----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGC 61226 | ||| | | || ||| | | |||||| | | | ||||| ||||| || || Sbjct 1741285 CAAAAGTTGAACAAGAAC-GAAAGATACTTCATTTCCCGTATCTTGGCTTTCTTCGCTGC 1741227 Query 61227 TTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTC 61286 || |||||||| ||||| ||||| || | || ||| | ||||| ||| | | Sbjct 1741226 CTCTGACGGTATTGTCAACGAGAACTTGGTCGAGAACTTCTCTGCCGAGGTCCAAATTCC 1741167 Query 61287 GGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA 61346 || || ||||||||||| ||||| ||| ||||| || | ||||| |||| || Sbjct 1741166 AGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCCGAGACCTA 1741107 Query 61347 CAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGC 61406 | | | | || || || ||| | | ||| | |||| ||| | |||||||| Sbjct 1741106 CTCTTTGTTAATTGACACTTACGTTAAGGACCCTAAGGAAGCTGACTTCCTTTTCAATGC 1741047 Query 61407 CATCGAGACGATACCGGCGGTGAAGCGGAAAG----CGGATTGGGCCTTCAATTGGATCA 61462 || || | || || || | | ||||| | || |||||||| | |||||| Sbjct 1741046 TATTGACAACATTCCA----TGCATCAGAAAGAAGGCTGACTGGGCCTTGAGATGGATCT 1740991 Query 61463 CC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTA 61521 | | || | | || || |||||| |||| | || ||||| | || |||||| | Sbjct 1740990 CTGACGACGAGGCCTTG-TTCGGTGAAAGATTAGTTGCTTTTGCTGCCGTTGAGGGTATT 1740932 Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581 || |||||||| || ||||| | ||||| ||||| ||||| | || | ||||| ||| Sbjct 1740931 TTCTTCAGTGGTTCTTTTGCTTCTATCTTCTGGTTAAAGAAGAGAGGTTTGATGCCAGGT 1740872 Query 61582 CTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTT 61641 |||| ||| |||||||||||| | | || || || | ||| ||| || || | Sbjct 1740871 TTGACTTTCTCCAATGAGTTGATCTGCAGAGATGAAGGTTTACATACTGACTTCGCCTGT 1740812 Query 61642 TTGCTATTCAAACGCTATCTGGTGAATCGTCC-GTCGGAGGAGCGTGTGGGTGAGATTGT 61700 ||| ||||| | || || || | || | | | | ||| | |||| | Sbjct 1740811 TTGTTATTCTCCCACT---TGCAAAACAGACCAGACCCA-GTTATTGTTGAGAAGATCAT 1740756 Query 61701 TCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCAT 61760 |||||| || | ||||| || ||||| | || ||||||||||| ||||| | | Sbjct 1740755 CACTGAGGCTGTCAAGATCGAGCAAGAATTCTTCACCGACGCTTTGCCAGTCTCCTTGTT 1740696 Query 61761 CGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGT 61820 || ||||| || | | |||| || || | ||||| ||||||||| | | ||| | Sbjct 1740695 GGGTATGAACGCTGAATTGATGTGCCAATACGTCGAATTCGTTGCCGACAGATTATTGAT 1740636 Query 61821 CGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGAT 61880 | |||||||| ||| ||| || || || |||||||| || |||||||| | || Sbjct 1740635 TGCTTTGGGTAACAAGAAGATTTACAACGTCAACAACCCATTCGACTTCATGGAAAACAT 1740576 Query 61881 TTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 || ||| ||| ||||| || || |||||||| | || | ||||| ||| Sbjct 1740575 CTCCTTGGCTGGTAAGACTAACTTCTTCGAGAAGAGAGTCAGTGACTACCAA 1740524 Score = 176 bits (194), Expect = 4e-39 Identities = 595/921 (65%), Gaps = 8/921 (1%) Strand=Plus/Plus Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 || |||||||| | || || |||| || |||||||| || || |||| ||| | Sbjct 1784826 TTACAGACAGCAACTTCCTCTGGAGAGGAGTACTCGACGATCTCACAACACAAGTTA--G 1784883 Query 66083 CAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACA 66140 || | || | ||||| |||| || || |||| || || ||||||||||||| Sbjct 1784884 AAGACTTAATTATACCCAAGTTCTTCTGGTTGGTCTTCTTGTTACAGGCATCCTTGTACA 1784943 Query 66141 TCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTG 66200 |||| | ||||| ||||| ||| || | ||| | |||||||| ||| | | | Sbjct 1784944 ACATGAAAGGAGTACCGGTTTCAGTCTGAGCCTCCAAGATGGCGTACCACAACTTTTGAG 1785003 Query 66201 CCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGG 66260 |||| || || | | | || |||| | |||||| ||||||| | | |||||| Sbjct 1785004 CCTTGACGGTGCTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACTCTTCGAATT 1785063 Query 66261 ATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCAC 66320 ||||| | ||||| | || | |||| | || |||| | | || | ||| |||| Sbjct 1785064 CGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCATTCAC 1785123 Query 66321 CATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC 66380 ||| |||||| || | ||| || | ||| || ||||| | || ||| | ||| | Sbjct 1785124 CATTCTGTTCCACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTC 1785183 Query 66381 GTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGG 66440 |||| || || | |||||||| || | | ||| | ||| || |||||||| | Sbjct 1785184 TAGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCTG 1785243 Query 66441 CATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGA 66500 | |||||||| |||| ||| | ||| || | || ||| ||| ||||||||||| | Sbjct 1785244 CGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAA 1785303 Query 66501 CGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCAT 66560 |||| | ||| |||||||||||||| | ||| || | | ||||| || | || | Sbjct 1785304 CGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTGGAGGTACCGT 1785363 Query 66561 TGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCAC 66620 | || || | ||| | || | || || | ||||| | || ||||||||||| Sbjct 1785364 TAGTACCAGCAATGTAAGCACCAGTAGAACGGATGTTGTGAATGTGCAAACCAATACCAC 1785423 Query 66621 CGGCCGTCTTCGAGATGGCAGCACA-ATCGGCCA-CTGTCCGGAATATGCCGTCAATGGA 66678 | || |||| || || ||||| || | | |||| | | || || ||||| || Sbjct 1785424 CAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTGTC--GTAAATACCATCAATAGA 1785481 Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738 ||| |||| || | | ||| | || ||| | ||| || || || | || Sbjct 1785482 GTCGTCCTTCATTGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTT 1785541 Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798 ||| | || || | | |||| || ||| || | ||||||| | ||||| | ||||| Sbjct 1785542 GAACAAAGTAGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTGTAAGATTCGAT 1785601 Query 66799 GACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGG 66858 ||| || |||| || || ||||| || | | | || ||| | | | ||| || Sbjct 1785602 GACCTTCTCGATGTCGTCACCGTGAATACCAATGGAAACTCTCATGATCAAATGTTGTGG 1785661 Query 66859 CCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918 | ||| | | | | | |||| | | | | || || | |||| ||||||| ||| Sbjct 1785662 TCTTTCAGCGACCTTACCGTTGACACGTAAAAGATACGATCTCTCCAAAGTCTTGAAACC 1785721 Query 66919 AAAGTACGAGTAATTGAAATC 66939 ||||| ||| |||||||| Sbjct 1785722 GAAGTAGTTGTAGTTGAAATC 1785742 Score = 125 bits (138), Expect = 6e-24 Identities = 351/529 (66%), Gaps = 10/529 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| ||| |||||| || | ||| || | |||||||| || ||| Sbjct 1783893 TCGACAGTGAACTGGATGGCAGCAGCAGCAGCTTGGGTTCTTAAGTAGTACATACCAGTC 1783952 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 || | || |||| | ||||||||||| || | ||| || | | | | || || Sbjct 1783953 TTCAAACCCTTCTTCCAACCGTAGAAATGCATAGA-GGTAAGCTTACCCATTGTTGGGTC 1784011 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | || || ||||||||||| ||||| ||| | | | | || |||||||| Sbjct 1784012 CTTGATGTGAATGTTCAACGACTGTGATTGATCAATGAAGGCAGCTCTGTCAGCAGCCAT 1784071 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTA-CAGGCGACGTACCTCAA 65315 ||||||||| | | || || ||||| || |||||||| |||| | | |||| Sbjct 1784072 ATCAATGATATGCTTTTGTGAGATTTCCCAAACAGTCTTGTATAAGGCCTTG-AGCTCAT 1784130 Query 65316 TTGGAAT-CTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372 |||||| | |||||| ||||| |||| || || | ||| ||| || || Sbjct 1784131 CTGGAATGTTAGCCAATGT-CTGGATAGAAC--CGTTGTTAGAAATGATGTTGTTCTTCA 1784187 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | | || ||| | ||||||||||| | || | | ||||| | |||| || || Sbjct 1784188 TGGCATCGTTCCAGATACCCAAATCGACCAAATCACGCAACAAGTATGGGTTGACGATTT 1784247 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||| || || | | || | | |||||||| || || || || || ||| Sbjct 1784248 GGAATTCTCCTGCTAACACTCTTCTAGAGTAGATGTTAGAAGTATATGGCTCGAAACATT 1784307 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | |||| || | ||||| | |||||| || |||||||| ||||| || ||||| |||| Sbjct 1784308 CGTTGTTACCCAATATTTGAGAAGTAGAAGCGGTTGGCATTGGAGCAACTAACAAGGAGT 1784367 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCA 65601 ||| ||| |||| | | | | || || |||| | ||||||| ||| Sbjct 1784368 TTCTCAAACCGTGCTTGGCCAACTTCTGCTTCAATGCATCCCAGTCCCA 1784416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567907938160