Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9 791 0.0 seq3 80.6 8e-13 >seq9 Length=680103 Score = 791 bits (876), Expect = 0.0 Identities = 481/506 (95%), Gaps = 4/506 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||||||| ||||| |||| |||||||||||||||||| Sbjct 11522 GTACTCATTCCAATTATAAGACCCAAAAGGGCCCTATATCGTTATTTATTGTCACTACCT 11581 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11582 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 11641 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 11642 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 11701 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11702 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 11761 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| |||||| ||| ||| | Sbjct 11762 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-CCCGAA-GGCATTGAT 11819 Query 301 TTTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| ||||||| | ||||||| |||| |||||||||||||||| Sbjct 11820 TTTTTATCTAATAAATACATCCCTTCCAAACAGTCGGGATTTTAAGCATGTATTAGCTCT 11879 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 11880 AGAATTACCACGGTTATCCAAGTAGTAAGTTACTATCAAATAAACGATAACTGATTTAAT 11939 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 11940 GAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTT 11999 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 12000 TGAGACAAGCATATGACTACTGGCAG 12025 >seq3 Length=2328052 Score = 80.6 bits (88), Expect = 8e-13 Identities = 87/108 (81%), Gaps = 7/108 (6%) Strand=Plus/Plus Query 300 TTTTTTATCTAATAAATACACCCCTTCCGA-AGTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||| ||||| || ||| ||| ||| | ||| ||| |||| ||||||||||| | | Sbjct 2195354 TTTTTAATCTA-TATATAT-CCCTTTCACATAGT--GGGATTTT-GCATGTATTAGTTTT 2195408 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGAT 406 ||| |||||||||||||||| ||||||| ||| ||||||||||| || Sbjct 2195409 AGAGTTACCACGGTTATCCA-ATAGTAAGTTACCATCAAATAAACAAT 2195455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399803648