Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq9 791 0.0
seq3 80.6 8e-13
>seq9
Length=680103
Score = 791 bits (876), Expect = 0.0
Identities = 481/506 (95%), Gaps = 4/506 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||
Sbjct 11522 GTACTCATTCCAATTATAAGACCCAAAAGGGCCCTATATCGTTATTTATTGTCACTACCT 11581
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11582 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 11641
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 11642 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 11701
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11702 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 11761
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||||||| ||| ||| |||||| ||| ||| |
Sbjct 11762 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-CCCGAA-GGCATTGAT 11819
Query 301 TTTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCT 358
||||||||||||||||||| ||||||| | ||||||| |||| ||||||||||||||||
Sbjct 11820 TTTTTATCTAATAAATACATCCCTTCCAAACAGTCGGGATTTTAAGCATGTATTAGCTCT 11879
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 11880 AGAATTACCACGGTTATCCAAGTAGTAAGTTACTATCAAATAAACGATAACTGATTTAAT 11939
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 11940 GAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTT 11999
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 12000 TGAGACAAGCATATGACTACTGGCAG 12025
>seq3
Length=2328052
Score = 80.6 bits (88), Expect = 8e-13
Identities = 87/108 (81%), Gaps = 7/108 (6%)
Strand=Plus/Plus
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGA-AGTCGGGGTTTTTAGCATGTATTAGCTCT 358
||||| ||||| || ||| ||| ||| | ||| ||| |||| ||||||||||| | |
Sbjct 2195354 TTTTTAATCTA-TATATAT-CCCTTTCACATAGT--GGGATTTT-GCATGTATTAGTTTT 2195408
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGAT 406
||| |||||||||||||||| ||||||| ||| ||||||||||| ||
Sbjct 2195409 AGAGTTACCACGGTTATCCA-ATAGTAAGTTACCATCAAATAAACAAT 2195455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399803648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |