Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 190 2e-43 >seq4 Length=2182181 Score = 190 bits (210), Expect = 2e-43 Identities = 580/891 (65%), Gaps = 18/891 (2%) Strand=Plus/Plus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 ||||||||||| | ||||| ||| |||| | || | |||| |||||||| ||||| Sbjct 397356 CGTCGTTTCGTTCTCTTCCCAATCAAGTACCACGAAGTCTGGCAAATGTACAAGAAGGCT 397415 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 ||||||||||||||||| | || || |||| ||| || || | | ||||||| | Sbjct 397416 GAAGCTTCCTTCTGGACTGCTGAAGAAATCGACTTGAGTAAGGATACCACTGACTGGAAC 397475 Query 61171 C----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGC 61226 | ||| | | || ||| | | |||||| | | | ||||| ||||| ||||| Sbjct 397476 CACAAGTTAAACAAG-AACGAAAGATACTTCATTTCCCGTATCTTGGCTTTCTTCGCCGC 397534 Query 61227 TTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTC 61286 || |||||||||||||| ||||| || | || ||| | || || ||| | | Sbjct 397535 CTCTGACGGTATCGTCAACGAGAACTTGGTCGAGAACTTCTCTGCCGAAGTCCAAATCCC 397594 Query 61287 GGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA 61346 || || ||||||||||| ||||| || ||||| || | ||||| |||| || Sbjct 397595 AGAAGCCAAGTGTTTCTACGGTTTCCAAATCATGATGGAAAACATTCACTCCGAGACTTA 397654 Query 61347 CAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGC 61406 | | | | || || || ||| | | ||| | |||| ||| | ||||| || Sbjct 397655 CTCTTTGTTAATTGACACTTACGTTAAGGACCCTAAGGAAGCTGACTTCCTTTTCAACGC 397714 Query 61407 CATCGAGACGATACCGGCGGTGAAGCGGAAA----GCGGATTGGGCCTTCAATTGGATCA 61462 ||| || | || || || | | |||| || |||||||| || | |||||| Sbjct 397715 CATTGACAACATTCC----ATGCATCAGAAAGAAGGCTGATTGGGCTTTGAGATGGATCT 397770 Query 61463 CCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 | | ||| || |||||| |||| | || ||||| | || || ||| | | Sbjct 397771 CTGATGATGAGGCCTTGTTCGGTGAAAGATTAGTTGCTTTTGCTGCCGTTGAAGGTATTT 397830 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 | |||||||| || || || | ||||| ||||||||||| | || | ||||| ||| Sbjct 397831 TCTTCAGTGGTTCTTTCGCTTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTT 397890 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 |||| ||| || |||||||| | | || || || |||| ||| || || || Sbjct 397891 TGACTTTCTCTAACGAGTTGATCTGCAGAGATGAAGGTTTGCACACTGACTTCGCCTGTT 397950 Query 61643 TGCTATTCAAACGCTATCTGGTGAATCGTCC-GTCGGAGGAGCGTGTGGGTGAGATTGTT 61701 || ||||| | || || || | || | | | | ||| | |||| | Sbjct 397951 TGTTATTCTCCCACT---TGCAAAACAGACCAGACCCA-GTTATTGTTGAGAAGATCATC 398006 Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761 |||||| || | || || || ||||| | || ||||||||||| ||||| | | Sbjct 398007 ACTGAGGCCGTCAAGATTGAGCAAGAATTCTTCACCGACGCTTTGCCAGTCTCCTTGTTG 398066 Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821 || ||||| | | |||| || || | ||||| ||||||||| | | ||| | Sbjct 398067 GGTATGAACGCCGAGTTGATGTGCCAATACGTCGAATTCGTTGCCGACAGATTATTGATT 398126 Query 61822 GATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881 | |||||||| ||| | |||| || | |||||||| || |||||||| | || Sbjct 398127 GCTTTGGGTAACAAGAAGGTCTACAACGTCACCAACCCATTCGACTTCATGGAAAACATC 398186 Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 || ||| ||| ||||| || || |||||||| | || | ||||| ||| Sbjct 398187 TCTTTGGCTGGTAAGACCAACTTCTTCGAGAAGAGAGTCAGTGACTACCAA 398237 Score = 154 bits (170), Expect = 1e-32 Identities = 596/932 (64%), Gaps = 12/932 (1%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || | ||| |||||||| | || || |||| || ||||| || || || ||| Sbjct 350781 GAGGCCAAGTTACAGACAGCAACTTCTTCTGGAGAGGAGTACTCAACGATCTCACAACAC 350722 Query 66074 AGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 | ||| | || | || | ||||| |||| ||| || |||| || || |||| Sbjct 350721 AAGTTA--GAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCAT 350664 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 ||||||||| |||| | ||||| ||||| ||| || | || | ||| |||| ||| | Sbjct 350663 CCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACCACA 350604 Query 66192 GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 | ||||| || || | | || |||| | |||||| ||||||| | | Sbjct 350603 ACTTTTGAGCCTTGACAGTGTTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACT 350544 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 ||||| ||||| | ||||| | || | |||| | || |||| | | || | Sbjct 350543 CCTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAG 350484 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||||||||| | ||||| || | ||| || | ||| || ||||| | || || Sbjct 350483 TCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGA 350424 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | | || | |||| || || | |||||||| || | | ||| | ||| || | Sbjct 350423 ACAAGTCTCTGGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGA 350364 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||||||| || |||||||| |||| ||| | ||| || | || ||| ||| |||| Sbjct 350363 AGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCAC 350304 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 ||||||| ||||| | ||| |||||||||||||| | ||| || | | ||||| | Sbjct 350303 CTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTCG 350244 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 | | ||||| || || | ||| | || | || || | ||||| | || || Sbjct 350243 AGGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGGATGTTGTGAATGTGCAAAC 350184 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGT 66671 |||||||||| || |||| || || ||||| || || | | || || | Sbjct 350183 CAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGTATCGTAAATACCAT 350124 Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731 |||| ||||| |||| |||| | ||| | || ||| | ||| || || || Sbjct 350123 CAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTAC 350064 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791 | || ||| | || || | | |||| || ||| || | ||||||| | || || | Sbjct 350063 CAGCGTTGAACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTATAAG 350004 Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGT 66851 || ||||| ||||||| || || ||||| || | | | || ||| | | | Sbjct 350003 ATTCAATGACCTTCTCAATGTCGTCACCGTGAATACCAATAGAAACTCTCATGATCAAAT 349944 Query 66852 ATTGAGGCCGTT---CGACC-AGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGG 66907 ||| || | || ||||| |||| |||| | | | | |||||| | || | Sbjct 349943 GTTGTGGTCTTTCAGCGACCTTGCCG----TTGACACGTAAAAGGTAGGATCTCTCTAAA 349888 Query 66908 GTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||||||| ||| ||||| ||| |||||||| Sbjct 349887 GTCTTGAAACCGAAGTAGTTGTAGTTGAAATC 349856 Score = 109 bits (120), Expect = 4e-19 Identities = 323/490 (66%), Gaps = 6/490 (1%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| ||| |||||| || | ||| || | |||||||| || ||| Sbjct 351705 TCGACAGTGAACTGGATGGCAGCAGCAGCAGCTTGGGTTCTCAAGTAGTACATACCAGTC 351646 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 || | || |||| | ||||||||||| || | ||| || | | | | || || Sbjct 351645 TTCAAACCCTTCTTCCAACCGTAGAAATGCATAGA-GGTAAGCTTACCCATTGTTGGGTC 351587 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | || || ||||| ||||| ||||| ||| | | | || |||||||| Sbjct 351586 CTTGATGTGGATGTTCAATGACTGTGATTGATCAATGAAGGCGGCTCTGTCAGCAGCCAT 351527 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTA-CAGGCGACGTACCTCAA 65315 |||||||||| | | || |||||||| ||||||||||| |||| | | ||| Sbjct 351526 GTCAATGATATGCTTTTGTGAGATCTCCCAAACGGTCTTGTATAAGGCCTTG-AGCTCGT 351468 Query 65316 TTGGAAT-CTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 |||||| | ||||| ||||| |||||| | ||| || || ||| Sbjct 351467 CTGGAATGTTAGGCAATG-ACTGGATAGAACCATTGTTAGAAATGATATTGTTCTTCATG 351409 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || || ||| | |||||| || | | | | | ||||| | |||| | |||| Sbjct 351408 GAATCGTTCCAGATACCCAAGTCAACCAAGTCACGCAACAAGTATGGGTTGACAATTTGG 351349 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || || | || || | | |||||||| || ||| || || || |||| Sbjct 351348 AATTCACCAGCCAACACTCTTCTTGAGTAGATGTTAGAGGTGTATGGCTCGAAACATTCG 351289 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 |||| || | ||||||| ||||| ||||||||||| ||||| || || || |||||| Sbjct 351288 TTGTTACCCAAGATTTGGGAGGTAGAAGCAGTTGGCATTGGAGCAACTAATAAGGAGTTT 351229 Query 65555 CGCAATCCGT 65564 | ||| |||| Sbjct 351228 CTCAAACCGT 351219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567937010320