Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1966 286 5e-75
seq1952 286 5e-75
seq1844 286 5e-75
seq1731 286 5e-75
seq1730 286 5e-75
>seq1966
Length=990
Score = 286 bits (316), Expect = 5e-75
Identities = 204/229 (89%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 733 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 790
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 791 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 850
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 851 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 909
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 910 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 958
>seq1952
Length=1000
Score = 286 bits (316), Expect = 5e-75
Identities = 204/229 (89%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 733 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 790
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 791 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 850
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 851 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 909
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 910 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 958
>seq1844
Length=1254
Score = 286 bits (316), Expect = 5e-75
Identities = 204/229 (89%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 522 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 465
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 464 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 405
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 404 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 346
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 345 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 297
>seq1731
Length=1946
Score = 286 bits (316), Expect = 5e-75
Identities = 204/229 (89%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 258 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 201
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 200 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 141
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 140 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 82
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 81 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 33
>seq1730
Length=1943
Score = 286 bits (316), Expect = 5e-75
Identities = 204/229 (89%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 1686 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1743
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 1744 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 1803
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| || ||||| || | | |||||||||||||||||||
Sbjct 1804 TCCCAGACCTCTCGGCCAAGGTT-TATACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1862
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1863 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751982661700
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |