Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq95 398 1e-108
seq2304 340 3e-91
seq48 340 3e-91
seq903 158 2e-36
>seq95
Length=519
Score = 398 bits (440), Expect = 1e-108
Identities = 275/307 (90%), Gaps = 11/307 (4%)
Strand=Plus/Plus
Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72
||| ||||||||||||||| | ||| | || |||| ||| ||| || |||||||
Sbjct 33 CCGAGCCTTTCCTTCTGGGTAACCG--TTCC--TCACGGGG-----CGGCGAACCAGGAC 83
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 84 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 143
Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 144 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 203
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct 204 AATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 263
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
|||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||
Sbjct 264 GAAGACTAACTACTGCGAAAGCATTTACCAAGGACGTTTTCATTAATCA-AGAACGAAAG 322
Query 312 TTAGGGG 318
|||||||
Sbjct 323 TTAGGGG 329
>seq2304
Length=597
Score = 340 bits (376), Expect = 3e-91
Identities = 234/261 (90%), Gaps = 10/261 (4%)
Strand=Plus/Plus
Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72
||| ||||||||||||||| | ||| | || |||| ||| ||| || |||||||
Sbjct 346 CCGAGCCTTTCCTTCTGGGTAACCG--TTCC--TCACGGGG-----CGGCGAACCAGGAC 396
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 397 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 456
Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 457 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 516
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct 517 AATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 576
Query 252 GAAGACTAACTACTGCGAAAG 272
|||||||||||||||||||||
Sbjct 577 GAAGACTAACTACTGCGAAAG 597
>seq48
Length=529
Score = 340 bits (376), Expect = 3e-91
Identities = 234/261 (90%), Gaps = 10/261 (4%)
Strand=Plus/Minus
Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72
||| ||||||||||||||| | ||| | || |||| ||| ||| || |||||||
Sbjct 252 CCGAGCCTTTCCTTCTGGGTAACCG--TTCC--TCACGGGG-----CGGCGAACCAGGAC 202
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 201 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 142
Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 141 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 82
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct 81 AATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 22
Query 252 GAAGACTAACTACTGCGAAAG 272
|||||||||||||||||||||
Sbjct 21 GAAGACTAACTACTGCGAAAG 1
>seq903
Length=296
Score = 158 bits (174), Expect = 2e-36
Identities = 100/107 (93%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1 TCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAA 60
Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| || |||||||| |||||||||||||| ||||||||||||||||
Sbjct 61 GCATTTACCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915178218240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |