Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq95 398 1e-108 seq2304 340 3e-91 seq48 340 3e-91 seq903 158 2e-36 >seq95 Length=519 Score = 398 bits (440), Expect = 1e-108 Identities = 275/307 (90%), Gaps = 11/307 (4%) Strand=Plus/Plus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 ||| ||||||||||||||| | ||| | || |||| ||| ||| || ||||||| Sbjct 33 CCGAGCCTTTCCTTCTGGGTAACCG--TTCC--TCACGGGG-----CGGCGAACCAGGAC 83 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 84 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 143 Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 144 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 203 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 204 AATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 263 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||||||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct 264 GAAGACTAACTACTGCGAAAGCATTTACCAAGGACGTTTTCATTAATCA-AGAACGAAAG 322 Query 312 TTAGGGG 318 ||||||| Sbjct 323 TTAGGGG 329 >seq2304 Length=597 Score = 340 bits (376), Expect = 3e-91 Identities = 234/261 (90%), Gaps = 10/261 (4%) Strand=Plus/Plus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 ||| ||||||||||||||| | ||| | || |||| ||| ||| || ||||||| Sbjct 346 CCGAGCCTTTCCTTCTGGGTAACCG--TTCC--TCACGGGG-----CGGCGAACCAGGAC 396 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 397 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 456 Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 457 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 516 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 517 AATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 576 Query 252 GAAGACTAACTACTGCGAAAG 272 ||||||||||||||||||||| Sbjct 577 GAAGACTAACTACTGCGAAAG 597 >seq48 Length=529 Score = 340 bits (376), Expect = 3e-91 Identities = 234/261 (90%), Gaps = 10/261 (4%) Strand=Plus/Minus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 ||| ||||||||||||||| | ||| | || |||| ||| ||| || ||||||| Sbjct 252 CCGAGCCTTTCCTTCTGGGTAACCG--TTCC--TCACGGGG-----CGGCGAACCAGGAC 202 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 201 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 142 Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 141 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 82 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 81 AATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 22 Query 252 GAAGACTAACTACTGCGAAAG 272 ||||||||||||||||||||| Sbjct 21 GAAGACTAACTACTGCGAAAG 1 >seq903 Length=296 Score = 158 bits (174), Expect = 2e-36 Identities = 100/107 (93%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 TCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAA 60 Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || || |||||||| |||||||||||||| |||||||||||||||| Sbjct 61 GCATTTACCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915178218240