Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1844 329 5e-88 seq759 226 5e-57 seq1966 172 9e-41 seq1952 172 9e-41 seq1731 172 9e-41 seq1730 172 9e-41 >seq1844 Length=1254 Score = 329 bits (364), Expect = 5e-88 Identities = 229/259 (88%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 379 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 320 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| | Sbjct 319 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTGACT 260 Query 121 C-ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 |||| | | || | ||||||||||||||||||||||||||||||||| |||| Sbjct 259 ATACCAGCAAAAGCTAGCAGCACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 200 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 199 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 140 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 139 AAAGAGCTCTCAATCTGTC 121 >seq759 Length=313 Score = 226 bits (250), Expect = 5e-57 Identities = 169/197 (86%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC- 121 ||||||||||||||||||||||| | || ||| | ||||||||||||||||| | Sbjct 1 CTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTGACTAT 60 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || | ||||||||||||||||||||||||||||||||| |||||| Sbjct 61 ACCAGCAAAAGCTAGCAGCACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 120 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 121 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 180 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 181 AGAGCTCTCAATCTGTC 197 >seq1966 Length=990 Score = 172 bits (190), Expect = 9e-41 Identities = 107/115 (93%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 876 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 935 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| Sbjct 936 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 990 >seq1952 Length=1000 Score = 172 bits (190), Expect = 9e-41 Identities = 107/115 (93%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 876 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 935 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| Sbjct 936 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 990 >seq1731 Length=1946 Score = 172 bits (190), Expect = 9e-41 Identities = 107/115 (93%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 115 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 56 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| Sbjct 55 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 1 >seq1730 Length=1943 Score = 172 bits (190), Expect = 9e-41 Identities = 107/115 (93%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1829 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 1888 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| Sbjct 1889 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 1943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796781628780