Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1844 329 5e-88
seq759 226 5e-57
seq1966 172 9e-41
seq1952 172 9e-41
seq1731 172 9e-41
seq1730 172 9e-41
>seq1844
Length=1254
Score = 329 bits (364), Expect = 5e-88
Identities = 229/259 (88%), Gaps = 1/259 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 379 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 320
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| | || ||| | ||||||||||||||||| |
Sbjct 319 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTGACT 260
Query 121 C-ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|||| | | || | ||||||||||||||||||||||||||||||||| ||||
Sbjct 259 ATACCAGCAAAAGCTAGCAGCACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 200
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 199 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 140
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 139 AAAGAGCTCTCAATCTGTC 121
>seq759
Length=313
Score = 226 bits (250), Expect = 5e-57
Identities = 169/197 (86%), Gaps = 1/197 (1%)
Strand=Plus/Plus
Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC- 121
||||||||||||||||||||||| | || ||| | ||||||||||||||||| |
Sbjct 1 CTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTGACTAT 60
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| | | || | ||||||||||||||||||||||||||||||||| ||||||
Sbjct 61 ACCAGCAAAAGCTAGCAGCACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 120
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 121 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 180
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 181 AGAGCTCTCAATCTGTC 197
>seq1966
Length=990
Score = 172 bits (190), Expect = 9e-41
Identities = 107/115 (93%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 876 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 935
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||||||||||||||||||||||| | || ||| | |||||||||||||||||
Sbjct 936 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 990
>seq1952
Length=1000
Score = 172 bits (190), Expect = 9e-41
Identities = 107/115 (93%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 876 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 935
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||||||||||||||||||||||| | || ||| | |||||||||||||||||
Sbjct 936 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 990
>seq1731
Length=1946
Score = 172 bits (190), Expect = 9e-41
Identities = 107/115 (93%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 115 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 56
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||||||||||||||||||||||| | || ||| | |||||||||||||||||
Sbjct 55 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 1
>seq1730
Length=1943
Score = 172 bits (190), Expect = 9e-41
Identities = 107/115 (93%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1829 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 1888
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||||||||||||||||||||||| | || ||| | |||||||||||||||||
Sbjct 1889 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAG 1943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796781628780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |