Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1916 313 4e-83 seq1894 313 4e-83 seq340 313 4e-83 seq289 311 1e-82 seq2300 251 1e-64 seq378 251 1e-64 seq762 197 2e-48 seq429 197 2e-48 >seq1916 Length=1024 Score = 313 bits (346), Expect = 4e-83 Identities = 179/183 (98%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAAT 60 Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTCGCTATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 120 Query 233 TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCTAGCCTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 180 Query 293 CAC 295 ||| Sbjct 181 CAC 183 >seq1894 Length=1064 Score = 313 bits (346), Expect = 4e-83 Identities = 179/183 (98%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAAT 60 Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTCGCTATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 120 Query 233 TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCTAGCCTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 180 Query 293 CAC 295 ||| Sbjct 181 CAC 183 >seq340 Length=415 Score = 313 bits (346), Expect = 4e-83 Identities = 179/183 (98%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 415 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAAT 356 Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 355 GTCGCTATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 296 Query 233 TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 295 TCTAGCCTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 236 Query 293 CAC 295 ||| Sbjct 235 CAC 233 >seq289 Length=395 Score = 311 bits (344), Expect = 1e-82 Identities = 193/207 (93%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 189 TACTAAGTTCAATTACTATTGCGATAACACTCATCAGTAGGGTAAAACTAACCTGTCTCA 248 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 308 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 309 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 368 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTA 207 ||||||||| ||||||||||||||||| Sbjct 369 GAACGCTTGACTGCCACAAGCCAGTTA 395 >seq2300 Length=561 Score = 251 bits (278), Expect = 1e-64 Identities = 157/169 (93%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 169 TACTAAGTTCAATTACTATTGCGATAACACTCATCAGTAGGGTAAAACTAACCTGTCTCA 110 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 109 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 50 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 49 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGC 1 >seq378 Length=411 Score = 251 bits (278), Expect = 1e-64 Identities = 157/169 (93%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 169 TACTAAGTTCAATTACTATTGCGATAACACTCATCAGTAGGGTAAAACTAACCTGTCTCA 110 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 109 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 50 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 49 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGC 1 >seq762 Length=321 Score = 197 bits (218), Expect = 2e-48 Identities = 126/137 (92%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 137 TACTAAGTTCAATTACTATTGCGATAACACTCATCAGTAGGGTAAAACTAACCTGTCTCA 78 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 77 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 18 Query 121 ATTCTGCTTCGGTATGA 137 ||||||||||||||||| Sbjct 17 ATTCTGCTTCGGTATGA 1 >seq429 Length=383 Score = 197 bits (218), Expect = 2e-48 Identities = 126/137 (92%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 243 TACTAAGTTCAATTACTATTGCGATAACACTCATCAGTAGGGTAAAACTAACCTGTCTCA 302 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 362 Query 121 ATTCTGCTTCGGTATGA 137 ||||||||||||||||| Sbjct 363 ATTCTGCTTCGGTATGA 379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854379665280