Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq2304 150 2e-34
seq48 150 2e-34
seq95 149 7e-34
>seq2304
Length=597
Score = 150 bits (166), Expect = 2e-34
Identities = 168/216 (78%), Gaps = 14/216 (6%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64
||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||
Sbjct 500 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 441
Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124
| || | |||||||||||||||||||||||| |||| ||||||||||||||| | ||||
Sbjct 440 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCGC 382
Query 125 ACACCAATGAAGGCATACGGGCTCACCAAG-AGGTAGGGCTGGGTAA--TGCAGTACTCG 181
|| ||| | |||| | ||| || ||| | |||| ||| | | |||||||||
Sbjct 381 ---CCCGTGAGG---AACGG--TTACCCAGAAGGAAAGGCTCGGTTAGGTCCAGTACTCG 330
Query 182 CC-GTGAGGCGGACCATAGCACCCAGCCCGAGTTTC 216
|| | ||||||||| ||| ||||| || |||
Sbjct 329 CCAGAAAGGCGGACCGGCTAACCAAGCCCAAGGTTC 294
>seq48
Length=529
Score = 150 bits (166), Expect = 2e-34
Identities = 168/216 (78%), Gaps = 14/216 (6%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64
||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||
Sbjct 98 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 157
Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124
| || | |||||||||||||||||||||||| |||| ||||||||||||||| | ||||
Sbjct 158 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCGC 216
Query 125 ACACCAATGAAGGCATACGGGCTCACCAAG-AGGTAGGGCTGGGTAA--TGCAGTACTCG 181
|| ||| | |||| | ||| || ||| | |||| ||| | | |||||||||
Sbjct 217 ---CCCGTGAGG---AACGG--TTACCCAGAAGGAAAGGCTCGGTTAGGTCCAGTACTCG 268
Query 182 CC-GTGAGGCGGACCATAGCACCCAGCCCGAGTTTC 216
|| | ||||||||| ||| ||||| || |||
Sbjct 269 CCAGAAAGGCGGACCGGCTAACCAAGCCCAAGGTTC 304
>seq95
Length=519
Score = 149 bits (164), Expect = 7e-34
Identities = 155/195 (79%), Gaps = 14/195 (7%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64
||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||
Sbjct 187 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 128
Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124
| || | |||||||||||||||||||||||| |||| ||||||||||||||| | ||||
Sbjct 127 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCGC 69
Query 125 ACACCAATGAAGGCATACGGGCTCACCAAG-AGGTAGGGCTGGGTAA--TGCAGTACTCG 181
|| ||| | |||| | ||| || ||| | |||| ||| | | |||||||||
Sbjct 68 ---CCCGTGAGG---AACGG--TTACCCAGAAGGAAAGGCTCGGTTAGGTCCAGTACTCG 17
Query 182 CC-GTGAGGCGGACC 195
|| | |||||||||
Sbjct 16 CCAGAAAGGCGGACC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595186276920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |