Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2304 150 2e-34 seq48 150 2e-34 seq95 149 7e-34 >seq2304 Length=597 Score = 150 bits (166), Expect = 2e-34 Identities = 168/216 (78%), Gaps = 14/216 (6%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| Sbjct 500 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 441 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || | |||||||||||||||||||||||| |||| ||||||||||||||| | |||| Sbjct 440 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCGC 382 Query 125 ACACCAATGAAGGCATACGGGCTCACCAAG-AGGTAGGGCTGGGTAA--TGCAGTACTCG 181 || ||| | |||| | ||| || ||| | |||| ||| | | ||||||||| Sbjct 381 ---CCCGTGAGG---AACGG--TTACCCAGAAGGAAAGGCTCGGTTAGGTCCAGTACTCG 330 Query 182 CC-GTGAGGCGGACCATAGCACCCAGCCCGAGTTTC 216 || | ||||||||| ||| ||||| || ||| Sbjct 329 CCAGAAAGGCGGACCGGCTAACCAAGCCCAAGGTTC 294 >seq48 Length=529 Score = 150 bits (166), Expect = 2e-34 Identities = 168/216 (78%), Gaps = 14/216 (6%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| Sbjct 98 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 157 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || | |||||||||||||||||||||||| |||| ||||||||||||||| | |||| Sbjct 158 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCGC 216 Query 125 ACACCAATGAAGGCATACGGGCTCACCAAG-AGGTAGGGCTGGGTAA--TGCAGTACTCG 181 || ||| | |||| | ||| || ||| | |||| ||| | | ||||||||| Sbjct 217 ---CCCGTGAGG---AACGG--TTACCCAGAAGGAAAGGCTCGGTTAGGTCCAGTACTCG 268 Query 182 CC-GTGAGGCGGACCATAGCACCCAGCCCGAGTTTC 216 || | ||||||||| ||| ||||| || ||| Sbjct 269 CCAGAAAGGCGGACCGGCTAACCAAGCCCAAGGTTC 304 >seq95 Length=519 Score = 149 bits (164), Expect = 7e-34 Identities = 155/195 (79%), Gaps = 14/195 (7%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| Sbjct 187 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 128 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || | |||||||||||||||||||||||| |||| ||||||||||||||| | |||| Sbjct 127 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCGC 69 Query 125 ACACCAATGAAGGCATACGGGCTCACCAAG-AGGTAGGGCTGGGTAA--TGCAGTACTCG 181 || ||| | |||| | ||| || ||| | |||| ||| | | ||||||||| Sbjct 68 ---CCCGTGAGG---AACGG--TTACCCAGAAGGAAAGGCTCGGTTAGGTCCAGTACTCG 17 Query 182 CC-GTGAGGCGGACC 195 || | ||||||||| Sbjct 16 CCAGAAAGGCGGACC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595186276920