Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2304 257 2e-66 seq95 257 2e-66 seq48 257 2e-66 >seq2304 Length=597 Score = 257 bits (284), Expect = 2e-66 Identities = 172/189 (91%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 387 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 446 Query 62 ATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 447 ATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-A 505 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| ||||||||| |||||||||| |||||| ||||||||||| Sbjct 506 TCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTC 565 Query 181 TTGGATTTA 189 ||||||||| Sbjct 566 TTGGATTTA 574 >seq95 Length=519 Score = 257 bits (284), Expect = 2e-66 Identities = 172/189 (91%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 74 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 133 Query 62 ATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 134 ATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-A 192 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| ||||||||| |||||||||| |||||| ||||||||||| Sbjct 193 TCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTC 252 Query 181 TTGGATTTA 189 ||||||||| Sbjct 253 TTGGATTTA 261 >seq48 Length=529 Score = 257 bits (284), Expect = 2e-66 Identities = 172/189 (91%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 211 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 152 Query 62 ATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 151 ATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-A 93 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| ||||||||| |||||||||| |||||| ||||||||||| Sbjct 92 TCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTC 33 Query 181 TTGGATTTA 189 ||||||||| Sbjct 32 TTGGATTTA 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511988195200