Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1844 387 3e-105 seq1966 363 3e-98 seq1952 363 3e-98 seq1731 363 3e-98 seq1730 363 3e-98 seq759 98.7 2e-18 >seq1844 Length=1254 Score = 387 bits (428), Expect = 3e-105 Identities = 276/312 (88%), Gaps = 5/312 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTC--GCCGGCTTCTT 77 || ||||||||||||||||||||||| || ||||| || ||| | | |||||| Sbjct 212 GAACGAGACCTTAACCTGCTAAATAGTGCTGCTAGCTTTTGCTGGTATAGTCA-CTTCTT 270 Query 78 AGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct 271 AGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 330 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||| Sbjct 331 TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-ACCTTGG 389 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 390 CCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTA 449 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| Sbjct 450 TTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCC 509 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 510 CTGCCCTTTGTA 521 >seq1966 Length=990 Score = 363 bits (402), Expect = 3e-98 Identities = 237/258 (92%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct 990 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 931 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | | Sbjct 930 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 872 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| Sbjct 871 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 812 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 811 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 752 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 751 ACGTCCCTGCCCTTTGTA 734 >seq1952 Length=1000 Score = 363 bits (402), Expect = 3e-98 Identities = 237/258 (92%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct 990 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 931 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | | Sbjct 930 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 872 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| Sbjct 871 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 812 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 811 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 752 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 751 ACGTCCCTGCCCTTTGTA 734 >seq1731 Length=1946 Score = 363 bits (402), Expect = 3e-98 Identities = 237/258 (92%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct 1 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 60 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | | Sbjct 61 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 119 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| Sbjct 120 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 179 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 180 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 239 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 240 ACGTCCCTGCCCTTTGTA 257 >seq1730 Length=1943 Score = 363 bits (402), Expect = 3e-98 Identities = 237/258 (92%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct 1943 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 1884 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | | Sbjct 1883 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 1825 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| Sbjct 1824 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 1765 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 1764 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 1705 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 1704 ACGTCCCTGCCCTTTGTA 1687 >seq759 Length=313 Score = 98.7 bits (108), Expect = 2e-18 Identities = 88/107 (82%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTC--GCCGGCTTCTT 77 || ||||||||||||||||||||||| || ||||| || ||| | | |||||| Sbjct 106 GAACGAGACCTTAACCTGCTAAATAGTGCTGCTAGCTTTTGCTGGTATAGTCA-CTTCTT 48 Query 78 AGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAG 123 ||||||||||||| | |||| ||||||||||||||||||||||||| Sbjct 47 AGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947177456640