Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1844 387 3e-105
seq1966 363 3e-98
seq1952 363 3e-98
seq1731 363 3e-98
seq1730 363 3e-98
seq759 98.7 2e-18
>seq1844
Length=1254
Score = 387 bits (428), Expect = 3e-105
Identities = 276/312 (88%), Gaps = 5/312 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTC--GCCGGCTTCTT 77
|| ||||||||||||||||||||||| || ||||| || ||| | | ||||||
Sbjct 212 GAACGAGACCTTAACCTGCTAAATAGTGCTGCTAGCTTTTGCTGGTATAGTCA-CTTCTT 270
Query 78 AGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136
||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 271 AGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 330
Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196
||||| ||||||||||||||||||||||||||||| |||||| ||||| | |||||||
Sbjct 331 TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-ACCTTGG 389
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 390 CCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTA 449
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct 450 TTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCC 509
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 510 CTGCCCTTTGTA 521
>seq1966
Length=990
Score = 363 bits (402), Expect = 3e-98
Identities = 237/258 (92%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct 990 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 931
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | |
Sbjct 930 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 872
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct 871 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 812
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct 811 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 752
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 751 ACGTCCCTGCCCTTTGTA 734
>seq1952
Length=1000
Score = 363 bits (402), Expect = 3e-98
Identities = 237/258 (92%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct 990 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 931
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | |
Sbjct 930 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 872
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct 871 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 812
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct 811 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 752
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 751 ACGTCCCTGCCCTTTGTA 734
>seq1731
Length=1946
Score = 363 bits (402), Expect = 3e-98
Identities = 237/258 (92%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct 1 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 60
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | |
Sbjct 61 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 119
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct 120 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 179
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct 180 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 239
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 240 ACGTCCCTGCCCTTTGTA 257
>seq1730
Length=1943
Score = 363 bits (402), Expect = 3e-98
Identities = 237/258 (92%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct 1943 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 1884
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | |
Sbjct 1883 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATAA-A 1825
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct 1824 CCTTGGCCGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 1765
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct 1764 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 1705
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 1704 ACGTCCCTGCCCTTTGTA 1687
>seq759
Length=313
Score = 98.7 bits (108), Expect = 2e-18
Identities = 88/107 (82%), Gaps = 4/107 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTC--GCCGGCTTCTT 77
|| ||||||||||||||||||||||| || ||||| || ||| | | ||||||
Sbjct 106 GAACGAGACCTTAACCTGCTAAATAGTGCTGCTAGCTTTTGCTGGTATAGTCA-CTTCTT 48
Query 78 AGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAG 123
||||||||||||| | |||| |||||||||||||||||||||||||
Sbjct 47 AGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947177456640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |