Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2300 239 7e-61
seq429 205 2e-50
seq378 205 2e-50
seq762 203 5e-50
seq289 203 5e-50
>seq2300
Length=561
Score = 239 bits (264), Expect = 7e-61
Identities = 231/288 (80%), Gaps = 13/288 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||
Sbjct 167 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 224
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 225 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 284
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC-----TTCGGC 173
||| | | ||| || | ||||||||| |||| |||||||||| |||| | | |
Sbjct 285 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCTCTTTTGAGTC 344
Query 174 CCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTG 230
| | ||| |||||||| ||||| || ||| ||||| | | | ||| || |
Sbjct 345 GCTGGACCATAGCAGGCTGGCAATGGTGCGCTTAACGGAAAGGTTTTGTGTGCT-TGCCG 403
Query 231 GCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| ||||| ||| |||||| ||||||||||||||||| |||||
Sbjct 404 GCGGATAGCAATGTCATGATGCGCGGGGATAAATCCTTTGCATACGAC 451
>seq429
Length=383
Score = 205 bits (226), Expect = 2e-50
Identities = 172/206 (83%), Gaps = 9/206 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||
Sbjct 245 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 188
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 187 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 128
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC-----TTCGGC 173
||| | | ||| || | ||||||||| |||| |||||||||| |||| | | |
Sbjct 127 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCTCTTTTGAGTC 68
Query 174 CCCGAACCTTAGCAGGCCGGCAACGG 199
| | ||| |||||||| ||||| ||
Sbjct 67 GCTGGACCATAGCAGGCTGGCAATGG 42
>seq378
Length=411
Score = 205 bits (226), Expect = 2e-50
Identities = 172/206 (83%), Gaps = 9/206 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||
Sbjct 167 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 224
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 225 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 284
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC-----TTCGGC 173
||| | | ||| || | ||||||||| |||| |||||||||| |||| | | |
Sbjct 285 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCTCTTTTGAGTC 344
Query 174 CCCGAACCTTAGCAGGCCGGCAACGG 199
| | ||| |||||||| ||||| ||
Sbjct 345 GCTGGACCATAGCAGGCTGGCAATGG 370
>seq762
Length=321
Score = 203 bits (224), Expect = 5e-50
Identities = 150/170 (88%), Gaps = 4/170 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||
Sbjct 135 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 192
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 193 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 252
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCT 168
||| | | ||| || | ||||||||| |||| |||||||||| |||||
Sbjct 253 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCT 302
>seq289
Length=395
Score = 203 bits (224), Expect = 5e-50
Identities = 150/170 (88%), Gaps = 4/170 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||
Sbjct 191 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 134
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 133 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 74
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCT 168
||| | | ||| || | ||||||||| |||| |||||||||| |||||
Sbjct 73 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCT 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819181112320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |