Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2300 239 7e-61 seq429 205 2e-50 seq378 205 2e-50 seq762 203 5e-50 seq289 203 5e-50 >seq2300 Length=561 Score = 239 bits (264), Expect = 7e-61 Identities = 231/288 (80%), Gaps = 13/288 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| Sbjct 167 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 224 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 225 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 284 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC-----TTCGGC 173 ||| | | ||| || | ||||||||| |||| |||||||||| |||| | | | Sbjct 285 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCTCTTTTGAGTC 344 Query 174 CCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTG 230 | | ||| |||||||| ||||| || ||| ||||| | | | ||| || | Sbjct 345 GCTGGACCATAGCAGGCTGGCAATGGTGCGCTTAACGGAAAGGTTTTGTGTGCT-TGCCG 403 Query 231 GCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| ||||| ||| |||||| ||||||||||||||||| ||||| Sbjct 404 GCGGATAGCAATGTCATGATGCGCGGGGATAAATCCTTTGCATACGAC 451 >seq429 Length=383 Score = 205 bits (226), Expect = 2e-50 Identities = 172/206 (83%), Gaps = 9/206 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| Sbjct 245 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 188 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 187 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 128 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC-----TTCGGC 173 ||| | | ||| || | ||||||||| |||| |||||||||| |||| | | | Sbjct 127 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCTCTTTTGAGTC 68 Query 174 CCCGAACCTTAGCAGGCCGGCAACGG 199 | | ||| |||||||| ||||| || Sbjct 67 GCTGGACCATAGCAGGCTGGCAATGG 42 >seq378 Length=411 Score = 205 bits (226), Expect = 2e-50 Identities = 172/206 (83%), Gaps = 9/206 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| Sbjct 167 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 224 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 225 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 284 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC-----TTCGGC 173 ||| | | ||| || | ||||||||| |||| |||||||||| |||| | | | Sbjct 285 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCTCTTTTGAGTC 344 Query 174 CCCGAACCTTAGCAGGCCGGCAACGG 199 | | ||| |||||||| ||||| || Sbjct 345 GCTGGACCATAGCAGGCTGGCAATGG 370 >seq762 Length=321 Score = 203 bits (224), Expect = 5e-50 Identities = 150/170 (88%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| Sbjct 135 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 192 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 193 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 252 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCT 168 ||| | | ||| || | ||||||||| |||| |||||||||| ||||| Sbjct 253 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCT 302 >seq289 Length=395 Score = 203 bits (224), Expect = 5e-50 Identities = 150/170 (88%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| Sbjct 191 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 134 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 133 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 74 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCT 168 ||| | | ||| || | ||||||||| |||| |||||||||| ||||| Sbjct 73 GAAAGCGATGATTTTTGCCCTGCACATTCTAGTTGGATACGAATAAGGCT 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819181112320