Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2098 479 9e-133 seq1541 338 2e-90 seq2304 280 4e-73 seq855 167 7e-39 seq48 167 7e-39 >seq2098 Length=779 Score = 479 bits (530), Expect = 9e-133 Identities = 300/320 (94%), Gaps = 5/320 (2%) Strand=Plus/Minus Query 188 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCC 247 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 779 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAGGCC 720 Query 248 ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTAT 307 |||||||||| |||||||||||||||| ||| |||| | ||| | ||| |||||||| Sbjct 719 ATGCGATTCGAAAAGTTATTATGAATCATCAAAGAGCTCGAAAG--CATTGATTTTTTAT 662 Query 308 CTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 365 |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct 661 CTAATAAATACACCCCTTCCAAACAGTCGGGGTTTTAAGCATGTATTAGCTCTAGAATTA 602 Query 366 CCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 601 CCACGGTTATCCAAGTAGTAAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 542 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 482 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 481 AAGCATATGACTACTGGCAG 462 >seq1541 Length=202 Score = 338 bits (374), Expect = 2e-90 Identities = 196/202 (97%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 47 TATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGG 106 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 202 TATTGTCACTACCTCCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGG 143 Query 107 ATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCG 166 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 142 ATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCG 83 Query 167 TTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 82 TTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 23 Query 227 AACCATCGCCGGCTCAAGGCCA 248 |||||||||| || |||||||| Sbjct 22 AACCATCGCCAGCACAAGGCCA 1 >seq2304 Length=597 Score = 280 bits (310), Expect = 4e-73 Identities = 167/175 (95%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 179 GTACTCATTCCAATTACAAGACCCAAAAAGGCCCTGTATCGTTATTTATTGTCACTACCT 120 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 60 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCA 175 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 59 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCA 5 >seq855 Length=302 Score = 167 bits (184), Expect = 7e-39 Identities = 101/107 (94%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 196 GTACTCATTCCAATTACAAGACCCAAAAAGGCCCTGTATCGTTATTTATTGTCACTACCT 255 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107 |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 256 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 302 >seq48 Length=529 Score = 167 bits (184), Expect = 7e-39 Identities = 101/107 (94%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 419 GTACTCATTCCAATTACAAGACCCAAAAAGGCCCTGTATCGTTATTTATTGTCACTACCT 478 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107 |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 479 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510364052480