Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2098 479 9e-133
seq1541 338 2e-90
seq2304 280 4e-73
seq855 167 7e-39
seq48 167 7e-39
>seq2098
Length=779
Score = 479 bits (530), Expect = 9e-133
Identities = 300/320 (94%), Gaps = 5/320 (2%)
Strand=Plus/Minus
Query 188 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCC 247
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 779 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAGGCC 720
Query 248 ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTAT 307
|||||||||| |||||||||||||||| ||| |||| | ||| | ||| ||||||||
Sbjct 719 ATGCGATTCGAAAAGTTATTATGAATCATCAAAGAGCTCGAAAG--CATTGATTTTTTAT 662
Query 308 CTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 365
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 661 CTAATAAATACACCCCTTCCAAACAGTCGGGGTTTTAAGCATGTATTAGCTCTAGAATTA 602
Query 366 CCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 601 CCACGGTTATCCAAGTAGTAAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 542
Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 482
Query 485 AAGCATATGACTACTGGCAG 504
||||||||||||||||||||
Sbjct 481 AAGCATATGACTACTGGCAG 462
>seq1541
Length=202
Score = 338 bits (374), Expect = 2e-90
Identities = 196/202 (97%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 47 TATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGG 106
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 202 TATTGTCACTACCTCCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGG 143
Query 107 ATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCG 166
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 142 ATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCG 83
Query 167 TTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 82 TTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 23
Query 227 AACCATCGCCGGCTCAAGGCCA 248
|||||||||| || ||||||||
Sbjct 22 AACCATCGCCAGCACAAGGCCA 1
>seq2304
Length=597
Score = 280 bits (310), Expect = 4e-73
Identities = 167/175 (95%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 179 GTACTCATTCCAATTACAAGACCCAAAAAGGCCCTGTATCGTTATTTATTGTCACTACCT 120
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 60
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCA 175
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 59 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCA 5
>seq855
Length=302
Score = 167 bits (184), Expect = 7e-39
Identities = 101/107 (94%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 196 GTACTCATTCCAATTACAAGACCCAAAAAGGCCCTGTATCGTTATTTATTGTCACTACCT 255
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107
|||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 256 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 302
>seq48
Length=529
Score = 167 bits (184), Expect = 7e-39
Identities = 101/107 (94%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 419 GTACTCATTCCAATTACAAGACCCAAAAAGGCCCTGTATCGTTATTTATTGTCACTACCT 478
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107
|||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 479 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510364052480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |