Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2244 293 1e-76
>seq2244
Length=40149
Score = 293 bits (324), Expect = 1e-76
Identities = 246/302 (81%), Gaps = 0/302 (0%)
Strand=Plus/Minus
Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437
||| || |||| | ||| | ||||| | |||||| ||||||| ||| ||| ||||
Sbjct 1210 CTACGAGGCTGACATAACGAACCTAAGCCGATCGTCTTTAAACACGGTCCATGGAATCTA 1151
Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497
|| ||||||||| |||||| |||| |||||||| | |||||||||||| |||| |||||
Sbjct 1150 ACGTCTATGCGAATGTTTGCGTGTTAAACCCGTACTCGTAATGAAAGTAAACGTAGGTGA 1091
Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| || |||||||| | || ||||||| ||||||||||| ||||||||||||| |
Sbjct 1090 GGGTCCTCAAGGGTGCATCGTCCACCGATCTTGATGTCTTCGCGTGGATTTGAGTAAAAA 1031
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||| ||||||| |||||||||||||||| |||| |||||||||| ||||||| |||||
Sbjct 1030 CATTCCTGTTGGCGCCCGAAAGATGGTGAATTATGACTGAATAGGGCGAAGCCACAGGAA 971
Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677
||||||||||||||||| ||||||| || ||||||||||||||||| ||| ||||||
Sbjct 970 ACTCTGGTGGAGGCTCGTAGCGGTTATGACGTGCAAATCGATCGTCGAATCCAGGTATAA 911
Query 678 GG 679
||
Sbjct 910 GG 909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079945731500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |