Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq330 116 3e-21 >seq330 Length=28712 Score = 116 bits (128), Expect = 3e-21 Identities = 214/314 (68%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 66310 CGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTA 66369 |||||| || | || | || || || | |||||||| |||||| | ||| | | || Sbjct 5727 CGACCAGTCCGCGTCTTCTTTGACTCGCCTCATAAATAAATCAGGAACCCATAATCCATA 5668 Query 66370 GAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTC 66429 ||| | ||| | | || ||||| ||| |||| |||||||| | || || | | || Sbjct 5667 GAATAAATCCCTGGTTCTGTGCTCTTCATTGCCATGATTTTTTCTCATATCTAAAATATC 5608 Query 66430 AAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCC 66489 |||||| || ||||||| || || | || || ||||| | ||| ||||| || || Sbjct 5607 AAAGATATCACCATGCCAAGGCTCTATATATATAGCGAATGCCCCCGGGCGTTTACCACC 5548 Query 66490 ACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTT 66549 |||||| || || || | || || || || || || | ||| || || | ||| Sbjct 5547 ACCTTGATCTACATATCTTGCCGTGTTATTAAACACGCGGAGCATTGGAACCAATCCGCC 5488 Query 66550 AGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAG 66609 ||| || || || |||| ||||| ||||| | || || || || ||||||| | Sbjct 5487 AGACTTTCCGTTTGTGCTTGCGATGAATGATCCACTGGCACGAATGTCATGAACATGAAC 5428 Query 66610 ACCAATACCACCGG 66623 |||||||||||||| Sbjct 5427 ACCAATACCACCGG 5414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397555741239200