Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1753 89.7 3e-16 seq560 84.2 1e-14 >seq1753 Length=17138 Score = 89.7 bits (98), Expect = 3e-16 Identities = 91/118 (77%), Gaps = 7/118 (6%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC-- 58 |||||||| ||||||| ||||| | | | |||||| | |||| | || | ||| Sbjct 8247 GAACCCAACGACTTTGCTTTCTGGAAGGTTGCCGATTGGGTCATCA----AAGAACGCAA 8192 Query 59 -CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 || |||||||||||| |||||||| |||||||||| |||||||||| ||| ||||| Sbjct 8191 ACCCATCCCTAGTCGGTATAGTTTATGGTTAAGACTGCGACGGTATCCGATGATCTTC 8134 >seq560 Length=532 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 67 TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 1 TAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395111470