Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq560 379 4e-103 seq1753 259 9e-67 seq479 140 6e-31 >seq560 Length=532 Score = 379 bits (420), Expect = 4e-103 Identities = 270/305 (89%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 352 GGGCCTTTCCTTCTGGCTAACCTTGGGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 297 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 296 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 237 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 236 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 177 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 176 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 117 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| Sbjct 116 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 58 Query 314 AGGGG 318 ||||| Sbjct 57 AGGGG 53 >seq1753 Length=17138 Score = 259 bits (286), Expect = 9e-67 Identities = 188/214 (88%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 107 GCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGT 165 |||||||||| |||| ||| |||||||||||||||||||||||| ||||||||||||| Sbjct 7918 GCCTTTGCTCAAATATATTGGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGT 7977 Query 166 TGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTG 225 ||||||||||||| |||||||||||||||||| || || ||| |||||||||| ||| Sbjct 7978 CGGTTTCTAGGACCATCGTAATGATTAATAGGGACCGTTGGAGGTATCAGTATTCAGTTG 8037 Query 226 TCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGA 285 |||||||||||||||||||||||| |||||| ||||| |||||||||| | |||||||| Sbjct 8038 TCAGAGGTGAAATTCTTGGATTTACTGAAGATTAACTGCTGCGAAAGCATATACCAAGGA 8097 Query 286 TG-TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | |||||||| |||| |||||||||||||||| Sbjct 8098 CGTTTTTCATTTATCA-AGAACGAAAGTTAGGGG 8130 >seq479 Length=1013 Score = 140 bits (154), Expect = 6e-31 Identities = 95/107 (89%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 167 GGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGT 226 ||||||||||||| |||||| ||||||||||| || || ||| |||||||||| |||| Sbjct 632 GGTTTCTAGGACCATCGTAATTATTAATAGGGACGGTTGGAGGTATCAGTATTCAGTTGT 573 Query 227 CAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 |||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct 572 CAGAGGTGAAATTCTTGGGTTTACTGAAGACTAACTGCTGCGAAAGC 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915182858304