Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq560 379 4e-103
seq1753 259 9e-67
seq479 140 6e-31
>seq560
Length=532
Score = 379 bits (420), Expect = 4e-103
Identities = 270/305 (89%), Gaps = 6/305 (2%)
Strand=Plus/Minus
Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74
|||||||||||||||| | || | |||| ||| | | || || |||||||||
Sbjct 352 GGGCCTTTCCTTCTGGCTAACCTTGGGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 297
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133
|||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct 296 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 237
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 236 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 177
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 117
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||||||||||||||||||| || ||||||| |||||||||||||| |||||||||||
Sbjct 116 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 58
Query 314 AGGGG 318
|||||
Sbjct 57 AGGGG 53
>seq1753
Length=17138
Score = 259 bits (286), Expect = 9e-67
Identities = 188/214 (88%), Gaps = 3/214 (1%)
Strand=Plus/Plus
Query 107 GCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGT 165
|||||||||| |||| ||| |||||||||||||||||||||||| |||||||||||||
Sbjct 7918 GCCTTTGCTCAAATATATTGGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGT 7977
Query 166 TGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTG 225
||||||||||||| |||||||||||||||||| || || ||| |||||||||| |||
Sbjct 7978 CGGTTTCTAGGACCATCGTAATGATTAATAGGGACCGTTGGAGGTATCAGTATTCAGTTG 8037
Query 226 TCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGA 285
|||||||||||||||||||||||| |||||| ||||| |||||||||| | ||||||||
Sbjct 8038 TCAGAGGTGAAATTCTTGGATTTACTGAAGATTAACTGCTGCGAAAGCATATACCAAGGA 8097
Query 286 TG-TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
| |||||||| |||| ||||||||||||||||
Sbjct 8098 CGTTTTTCATTTATCA-AGAACGAAAGTTAGGGG 8130
>seq479
Length=1013
Score = 140 bits (154), Expect = 6e-31
Identities = 95/107 (89%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 167 GGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGT 226
||||||||||||| |||||| ||||||||||| || || ||| |||||||||| ||||
Sbjct 632 GGTTTCTAGGACCATCGTAATTATTAATAGGGACGGTTGGAGGTATCAGTATTCAGTTGT 573
Query 227 CAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273
|||||||||||||||||| |||| |||||||||||| ||||||||||
Sbjct 572 CAGAGGTGAAATTCTTGGGTTTACTGAAGACTAACTGCTGCGAAAGC 526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915182858304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |