Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1504 369 6e-100 >seq1504 Length=92773 Score = 369 bits (408), Expect = 6e-100 Identities = 256/287 (89%), Gaps = 5/287 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAA-CTAACCTGTCTC 59 ||||||| |||||| |||| | ||| ||||||||||||||||| || ||||||||| Sbjct 46562 TACTAAGTTCAATTACTATTGCGATGACACTCATCAGTAGGGTAAAAACTGACCTGTCTC 46503 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 46502 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTAAACAATCCAACGCTTACCG 46443 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC-AAAAAGCAACGTCGCT 178 |||||||||||||||||||||||||||| |||||||||| ||| ||||||||| | |||| Sbjct 46442 AATTCTGCTTCGGTATGATAGGAAGAGCGGACATCGAAGAATCAAAAAAGCAATGCCGCT 46383 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA-- 236 ||||||||||| |||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct 46382 ATGAACGCTTGACTGCCACAAGCCAGTTATACCCGTGCTAACTTTTCTGACACCTCTAGC 46323 Query 237 -GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282 || ||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct 46322 TGCTTCAAATTCCGAAGGACTAAAGGATCGATAGGCCACCCTTTCAT 46276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854383997088