Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq560 257 2e-66 seq1753 165 8e-39 seq479 86.0 6e-15 >seq560 Length=532 Score = 257 bits (284), Expect = 2e-66 Identities = 173/191 (91%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 308 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 249 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 248 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 190 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| |||||||| ||||||||||||||||| ||||||||||| Sbjct 189 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 130 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 129 TTGGATTTATT 119 >seq1753 Length=17138 Score = 165 bits (182), Expect = 8e-39 Identities = 125/145 (86%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 46 GCCTTTGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGT 104 |||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||| Sbjct 7918 GCCTTTGCTCAAATATATTGGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGT 7977 Query 105 AGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATT 164 ||||||||||||| | |||||||| |||| ||| || || ||| |||||||||| || Sbjct 7978 CGGTTTCTAGGACCATC-GTAATGATTAATAGGGACCGTTGGAGGTATCAGTATTCAGTT 8036 Query 165 GTCAAAGGTGAAATTCTTGGATTTA 189 |||| |||||||||||||||||||| Sbjct 8037 GTCAGAGGTGAAATTCTTGGATTTA 8061 >seq479 Length=1013 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 106 GGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTG 165 ||||||||||||| | ||||| || |||| ||| || || ||| |||||||||| ||| Sbjct 632 GGTTTCTAGGACCATC-GTAATTATTAATAGGGACGGTTGGAGGTATCAGTATTCAGTTG 574 Query 166 TCAAAGGTGAAATTCTTGGATTTA 189 ||| ||||||||||||||| |||| Sbjct 573 TCAGAGGTGAAATTCTTGGGTTTA 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511990709920