Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq560 257 2e-66
seq1753 165 8e-39
seq479 86.0 6e-15
>seq560
Length=532
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 308 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 249
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 248 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 190
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 189 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 130
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 129 TTGGATTTATT 119
>seq1753
Length=17138
Score = 165 bits (182), Expect = 8e-39
Identities = 125/145 (86%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 46 GCCTTTGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGT 104
|||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||
Sbjct 7918 GCCTTTGCTCAAATATATTGGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGT 7977
Query 105 AGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATT 164
||||||||||||| | |||||||| |||| ||| || || ||| |||||||||| ||
Sbjct 7978 CGGTTTCTAGGACCATC-GTAATGATTAATAGGGACCGTTGGAGGTATCAGTATTCAGTT 8036
Query 165 GTCAAAGGTGAAATTCTTGGATTTA 189
|||| ||||||||||||||||||||
Sbjct 8037 GTCAGAGGTGAAATTCTTGGATTTA 8061
>seq479
Length=1013
Score = 86.0 bits (94), Expect = 6e-15
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 106 GGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTG 165
||||||||||||| | ||||| || |||| ||| || || ||| |||||||||| |||
Sbjct 632 GGTTTCTAGGACCATC-GTAATTATTAATAGGGACGGTTGGAGGTATCAGTATTCAGTTG 574
Query 166 TCAAAGGTGAAATTCTTGGATTTA 189
||| ||||||||||||||| ||||
Sbjct 573 TCAGAGGTGAAATTCTTGGGTTTA 550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511990709920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |