Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1504 226 9e-57 >seq1504 Length=92773 Score = 226 bits (250), Expect = 9e-57 Identities = 203/252 (81%), Gaps = 16/252 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCC--TTAGGACACCTGCGTTA 64 |||||| ||||| |||||||||||||||||||||||||||| | |||||| |||||||| Sbjct 46239 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCCCTCAGGACATCTGCGTTA 46180 Query 65 TGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124 | ||||||| |||||| |||||| ||||||||||||||||||||||||| ||| |||||| Sbjct 46179 TAGTTTAACTGATGTGACGCCCCTGCCAAACTCCCCACCTGACAATGTCTTCAGCCCGGA 46120 Query 125 TCGGCCCGCGAAGG--ACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCA 182 || | |||| | | ||||||| || |||| ||| || ||||| |||| ||||||| | Sbjct 46119 TCAG-CCGCTATCGCAACCTTAATGCTAGAACGTGGACGATGAAGTCCAGCTCCGCTTAA 46061 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 |||| ||||| ||| || ||| |||||||||||| | ||| ||||||| Sbjct 46060 TTGAATAAGTGAAATCACTATAGAGGTAGTGGTATT--------GTTGAA---GCTCCCA 46012 Query 243 CTTATTCTACAC 254 |||| ||||||| Sbjct 46011 CTTAATCTACAC 46000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635169372704