Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06-
03] 1,873 sequences; 16,614,112 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1504 226 9e-57
>seq1504
Length=92773
Score = 226 bits (250), Expect = 9e-57
Identities = 203/252 (81%), Gaps = 16/252 (6%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCC--TTAGGACACCTGCGTTA 64
|||||| ||||| |||||||||||||||||||||||||||| | |||||| ||||||||
Sbjct 46239 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCCCTCAGGACATCTGCGTTA 46180
Query 65 TGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124
| ||||||| |||||| |||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 46179 TAGTTTAACTGATGTGACGCCCCTGCCAAACTCCCCACCTGACAATGTCTTCAGCCCGGA 46120
Query 125 TCGGCCCGCGAAGG--ACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCA 182
|| | |||| | | ||||||| || |||| ||| || ||||| |||| ||||||| |
Sbjct 46119 TCAG-CCGCTATCGCAACCTTAATGCTAGAACGTGGACGATGAAGTCCAGCTCCGCTTAA 46061
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|||| ||||| ||| || ||| |||||||||||| | ||| |||||||
Sbjct 46060 TTGAATAAGTGAAATCACTATAGAGGTAGTGGTATT--------GTTGAA---GCTCCCA 46012
Query 243 CTTATTCTACAC 254
|||| |||||||
Sbjct 46011 CTTAATCTACAC 46000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635169372704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |