Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20hagerdaliae_20[genbank_20GCA_5F001655755.1_202016-06- 03] 1,873 sequences; 16,614,112 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1645 199 1e-48 >seq1645 Length=9137 Score = 199 bits (220), Expect = 1e-48 Identities = 164/199 (82%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 117 CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 ||| ||||| | | ||||| |||| ||||| || ||| |||||||||| |||| ||||| Sbjct 3130 CGTCTCTCAAGTCCACTCTCTGGAACCGAACGCTTATTTCCCGTTACCCTTTGAAACCAT 3071 Query 177 GGTAGGCCA--CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG 234 |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3070 GGTAAGTCATACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG 3011 Query 235 CCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC 294 || || ||| || ||| |||| | |||||||||||||||| ||| |||| |||| | | Sbjct 3010 CCAGCACAACGCGATGTGATTTGAAAAGTTATTATGAATCATCAAAGAGCTCCGAGGAGA 2951 Query 295 GTTGGTTTTTTATCTAATA 313 | | |||||||| |||| Sbjct 2950 ATCGATTTTTTATGCAATA 2932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510371710208