Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq88 379 4e-103 >seq88 Length=8330 Score = 379 bits (420), Expect = 4e-103 Identities = 240/257 (93%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAC 122 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2419 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 2478 Query 123 ATTAGCATGGAATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGC 181 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2479 ATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCAT 2538 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct 2539 CGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTCT 2598 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct 2599 TGGATTTACTGAAGACTAACTACTGCGAAAGCATTTACCAAGGACGTTTTCATTAATCA- 2657 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 2658 AGAACGAAAGTTAGGGG 2674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915197291008