Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq88 706 0.0
>seq88
Length=8330
Score = 706 bits (782), Expect = 0.0
Identities = 562/668 (84%), Gaps = 12/668 (2%)
Strand=Plus/Plus
Query 19 GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 78
||| ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| |||
Sbjct 4193 GCCATGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGT 4252
Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138
||||| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||
Sbjct 4253 AAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGA 4312
Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198
||||||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||
Sbjct 4313 AAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGG 4372
Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258
||||| | |||||||| | | || | | | |||| ||| || |||| | |
Sbjct 4373 GCTTGAGATCAGACTTG---GTATTTTGTATGTCTTGCTTTCGGGCGGGGC-CTCTGCAG 4428
Query 259 CGGTCAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317
| || |||||||| | ||||| || ||| || || || || ||||| ||||
Sbjct 4429 TTTACTGGGCCAGCATCGGTTCGGGTGGCAGGACAATTGCGGAGG-AACGTGGCACCCTC 4487
Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375
||| ||||||||||| | | || | ||| | |||||| |||||| ||| |
Sbjct 4488 --GGGTGTGTTATAGCCTCTGTCG--ATACTGCCTGTCTGGACCGAGGTCTGCGACGTTT 4543
Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435
| ||||||||||||| ||||| | |||| |||||||||| ||||||||||||||||||
Sbjct 4544 GTCTAGGATGCTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTC 4603
Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495
|||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct 4604 TAACGTCTATGCGAGTGTTTGGGTGTTAAACCCGTACGCGTAATGAAAGTGAACGTAGGT 4663
Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555
| | |||| |||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 4664 GAGGGCCCGCAAGGGTGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAG 4723
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4724 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 4783
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||
Sbjct 4784 AAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTAT 4843
Query 676 AGGGGCGA 683
||||||||
Sbjct 4844 AGGGGCGA 4851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079993650800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |