Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq88 706 0.0 >seq88 Length=8330 Score = 706 bits (782), Expect = 0.0 Identities = 562/668 (84%), Gaps = 12/668 (2%) Strand=Plus/Plus Query 19 GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 78 ||| ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||| Sbjct 4193 GCCATGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGT 4252 Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138 ||||| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| || Sbjct 4253 AAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGA 4312 Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 ||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| Sbjct 4313 AAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGG 4372 Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258 ||||| | |||||||| | | || | | | |||| ||| || |||| | | Sbjct 4373 GCTTGAGATCAGACTTG---GTATTTTGTATGTCTTGCTTTCGGGCGGGGC-CTCTGCAG 4428 Query 259 CGGTCAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 | || |||||||| | ||||| || ||| || || || || ||||| |||| Sbjct 4429 TTTACTGGGCCAGCATCGGTTCGGGTGGCAGGACAATTGCGGAGG-AACGTGGCACCCTC 4487 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| ||||||||||| | | || | ||| | |||||| |||||| ||| | Sbjct 4488 --GGGTGTGTTATAGCCTCTGTCG--ATACTGCCTGTCTGGACCGAGGTCTGCGACGTTT 4543 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | ||||||||||||| ||||| | |||| |||||||||| |||||||||||||||||| Sbjct 4544 GTCTAGGATGCTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTC 4603 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||| Sbjct 4604 TAACGTCTATGCGAGTGTTTGGGTGTTAAACCCGTACGCGTAATGAAAGTGAACGTAGGT 4663 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 | | |||| |||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 4664 GAGGGCCCGCAAGGGTGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAG 4723 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4724 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 4783 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||| Sbjct 4784 AAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTAT 4843 Query 676 AGGGGCGA 683 |||||||| Sbjct 4844 AGGGGCGA 4851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079993650800