Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq88 324 2e-86 >seq88 Length=8330 Score = 324 bits (358), Expect = 2e-86 Identities = 228/259 (88%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 3178 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 3119 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| | Sbjct 3118 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTAACT 3059 Query 121 C-ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 |||| | | || | |||||||| |||||||||||||||||||||||| |||| Sbjct 3058 ATACCAGCAAAAGCTAGCAGTACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATT 2999 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2998 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 2939 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 2938 AAAGAGCTCTCAATCTGTC 2920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797715176