Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq88 383 3e-104 >seq88 Length=8330 Score = 383 bits (424), Expect = 3e-104 Identities = 273/311 (88%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78 || |||||||||||||| |||||||| || ||||| || ||| ||||||| Sbjct 3011 GAACGAGACCTTAACCTACTAAATAGTACTGCTAGCTTTTGCTGGTATAGTTACTTCTTA 3070 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 3071 GAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 3130 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 |||| ||||||||||||||||||||||||||||| |||||| ||||| | |||||||| Sbjct 3131 TAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTATTTAACCTTGGC 3190 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 || ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 3191 CGAGAGGTCTGGGAAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTAT 3250 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| Sbjct 3251 TGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 3310 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 3311 TGCCCTTTGTA 3321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197196288