Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq88 246 5e-63
>seq88
Length=8330
Score = 246 bits (272), Expect = 5e-63
Identities = 232/286 (81%), Gaps = 11/286 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||
Sbjct 6935 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 6992
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 6993 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 7052
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC---TTCGGCCC 175
||||| | ||| || | ||||||||| |||| |||||||||| |||| || | | |
Sbjct 7053 GAACGCGATGATTTTTGCCCTGCACATTTTAGTTGGATACGAATAAGGCTTTTTAGTCGC 7112
Query 176 CGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGC 232
| ||| |||||||| ||||| || ||| ||||| | | | ||| || ||
Sbjct 7113 TGGACCATAGCAGGCTGGCAATGGTGCGCTTAACGGAAAGGTTTTGTGTGCT-TGCCGGT 7171
Query 233 GGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| ||||| ||| |||||| ||||||||||||||||| |||||
Sbjct 7172 GGATAGCAATGTCATGATGCGCGGGGATAAATCCTTTGCATACGAC 7217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819197650944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |