Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq88 246 5e-63 >seq88 Length=8330 Score = 246 bits (272), Expect = 5e-63 Identities = 232/286 (81%), Gaps = 11/286 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| Sbjct 6935 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 6992 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 6993 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 7052 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGC---TTCGGCCC 175 ||||| | ||| || | ||||||||| |||| |||||||||| |||| || | | | Sbjct 7053 GAACGCGATGATTTTTGCCCTGCACATTTTAGTTGGATACGAATAAGGCTTTTTAGTCGC 7112 Query 176 CGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGC 232 | ||| |||||||| ||||| || ||| ||||| | | | ||| || || Sbjct 7113 TGGACCATAGCAGGCTGGCAATGGTGCGCTTAACGGAAAGGTTTTGTGTGCT-TGCCGGT 7171 Query 233 GGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| ||||| ||| |||||| ||||||||||||||||| ||||| Sbjct 7172 GGATAGCAATGTCATGATGCGCGGGGATAAATCCTTTGCATACGAC 7217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197650944