Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq88 780 0.0 >seq88 Length=8330 Score = 780 bits (864), Expect = 0.0 Identities = 480/507 (95%), Gaps = 5/507 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 2213 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGTATCGTTATTTATTGTCACTACCT 2154 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2153 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2094 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 2093 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 2034 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2033 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 1974 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| | |||| || ||| | Sbjct 1973 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-CTCGAA-AGCATTGAT 1916 Query 301 TTTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCT 358 |||||||||||||||||||||||| || | |||||||||||| |||||||||||||||| Sbjct 1915 TTTTTATCTAATAAATACACCCCTCCCAAACAGTCGGGGTTTTAAGCATGTATTAGCTCT 1856 Query 359 AGAATTACCACGGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1855 AGAATTACCACGGTTATCCAAGTAGTAAAGGTACTATCAAATAAACGATAACTGATTTAA 1796 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1795 TGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCT 1736 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 1735 TTGAGACAAGCATATGACTACTGGCAG 1709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510395529216