Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq46 163 2e-35
>seq46
Length=215403
Score = 163 bits (180), Expect = 2e-35
Identities = 567/881 (64%), Gaps = 18/881 (2%)
Strand=Plus/Minus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
||||| ||||||||||| || ||||||| || | | || ||||||| | |||
Sbjct 150031 GAGAACCCTCGTCGTTTTGTCATGTTCCCAATTAGATTCCATGAAATTTGGCAATTTTAC 149972
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161
|||||||| |||||||| |||||||| | || || ||||||| ||||| | ||
Sbjct 149971 AAAAAGGCTGAAGCTTCTTTCTGGACTGCCGAAGAAATCGATTTAAGTAAAGATTTAAAC 149912
Query 61162 GACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTG-------GC 61214
|| ||| | || | | || ||| |||| | ||| | | | ||
Sbjct 149911 GATTGGAGAAATAAATTAAATGACGACGAACGTTTCTT----CATTTCTAGAATCCTTGC 149856
Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274
||||||||| ||||| || |||||||| ||||| ||||| | ||| ||| | ||
Sbjct 149855 GTTCTTTGCTGCTTCAGATGGTATCGTTAATGAAAATTTGGTTGAAAACTTCTCAGCTGA 149796
Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334
|| ||| | | || || | ||||| || ||||| || ||||| || | ||
Sbjct 149795 AGTTCAAATTCCAGAAGCCAAGTCCTTCTATGGTTTCCAAATCATGATGGAAAACATTCA 149736
Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394
|| || | || || | ||||| || || |||| ||| | |||| ||
Sbjct 149735 TTCTGAAACTTATTCCCTTTTAATCGACACTTATATCAAGGATCCAAAGGAAGCCGACTA 149676
Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454
||||||||||| || || || || | | ||| || || ||||| | |
Sbjct 149675 TTTGTTCAATGCTATTGACCATATTCCATGTATTAGAAAGAAGGCTGACTGGGCTCTTAG 149616
Query 61455 TTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512
|||||||| || || | | || ||||| |||| |||| | ||||| || | ||
Sbjct 149615 ATGGATCAC-AG-ACGATGAAGCCTTATTTGCTGAAAGATTAGTTGCATTCGCTGCTGTT 149558
Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572
|| ||| | || |||||||| || || || | ||||||||||| ||||| | || |
Sbjct 149557 GAAGGTATTTTCTTCAGTGGTTCATTCGCATCCATCTTTTGGTTAAAGAAGAGAGGTTTA 149498
Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGAT 61632
||||| ||| | || ||| ||| || || || | | || || || | ||| ||||
Sbjct 149497 ATGCCTGGTTTAACATTCTCCAACGAATTAATCTGTAGAGATGAAGGTTTACATACTGAT 149438
Query 61633 TTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGT 61692
|||||| ||| ||||| | || ||| ||| | || | | || | | |
Sbjct 149437 TTTGCTTGTTTATTATTCTCCC---ATTTGGAAAATAGACCAGCTGCAGAAATTATTGAA 149381
Query 61693 GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTC 61752
||||| || |||||| || |||| ||| ||||||| | ||||| || || || ||
Sbjct 149380 AAGATTATTGTTGAGGCTGTTGCTATTGAAAAGGAATTCTTCACTGATGCCTTACCTGTT 149321
Query 61753 TCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGT 61812
| | || ||||| ||| |||||| || || ||||||||||||| || |
Sbjct 149320 AGTTTGTTAGGTATGAACTGTAAGTTAATGTGTCAATACGTTGAATTTGTTGCTGATAGA 149261
Query 61813 CTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATG 61872
| || || | || |||| ||| | | || ||| | || |||||||||||||||
Sbjct 149260 TTATTAGTAGCATTTGGTAATAAGAAGGTTTACAATGTCACTAATCCATTTGATTTCATG 149201
Query 61873 GACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
|| | ||||| | | ||| ||||| || || ||||| ||
Sbjct 149200 GAAAACATTTCATTAGCTGGTAAGACCAACTTCTTCGAAAA 149160
Score = 93.3 bits (102), Expect = 3e-14
Identities = 221/334 (66%), Gaps = 0/334 (0%)
Strand=Plus/Plus
Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372
||||||||| | ||||| || | ||| |||| ||| || ||||| | || |||
Sbjct 192452 CCAATCACCGTTTTGTTCAACTCTCTTCATGAATAAATCTGGAATCCATAAAGCTGGGAA 192511
Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432
| ||| | ||||| || || | || ||||| || | | || | ||| |||||
Sbjct 192512 TAAATCTCTTGCTCTAATTTCTTCTTTACCTTGATTCTTTCTAATATCAATGAAATCAAA 192571
Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492
|| || |||||||||||||| | || | || || | || | ||| |||||
Sbjct 192572 AATATCAGCATGCCATGGTTCTAAATAAAGAGCAAAAGCACCTGGTCTCTTGTTACCACC 192631
Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552
||| || || || ||||| ||||||||||||||| | ||| || | || ||||| ||
Sbjct 192632 TTGATCAACATAACGAGCAGTATTGTTGAAGACACGGACCATAGGAATGATACCGTTGGA 192691
Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612
| ||||| || || | || | || || || || | |||| || | |||
Sbjct 192692 AGTACCATTAGTACCAGCAATATAAGCACCAGTGGCACGAATGTTATGAATATGTAAACC 192751
Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAA 66646
||||||||| || |||| ||||| |||||||
Sbjct 192752 AATACCACCAGCACTCTTTGAGATTAAAGCACAA 192785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566565773440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |