Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq11 140 3e-28
seq5 120 2e-22
>seq11
Length=408711
Score = 140 bits (154), Expect = 3e-28
Identities = 229/330 (69%), Gaps = 0/330 (0%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||||||||| || |||||||| | || |||||||| || || |||| | ||| || |
Sbjct 180848 CATAAATAGGTCGGGTATCCATAATGCATAGAAGAGGTCACGAGCTCTTAACTCTTCTTT 180907
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
|| |||||||| | ||||| ||||| || || || || |||||||||||| |||||
Sbjct 180908 ACCATGATTTTTTCTTAAGTCAAGGAATTCGAATATATCATTATGCCATGGTTCAAGGTA 180967
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
|| || || | |||| | |||| || ||||| || ||||| | ||| || ||
Sbjct 180968 TATTGCAAAAGCGCCCGGTCTTTTGTTTCCCCCTTGATCAACGTATCTAGCAGTGTTATT 181027
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579
||| || |||||||| || || | ||| || || | || || || || ||| |||
Sbjct 181028 GAAAACTCGCAACATGGGAACTAACCCATTCGAGGTACCGTTAGTTCCTCTTATGTAGGA 181087
Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGC 66639
|||| | | |||| |||||| | | || || ||||| || ||| |||||
Sbjct 181088 ACCTCTAGATCTAATATTATGAACACTTAAGCCTATTCCACCAGCGAACTTGGAGATACT 181147
Query 66640 AGCACAATCGGCCACTGTCCGGAATATGCC 66669
|||||||| |||| |||| | |||| ||
Sbjct 181148 TGCACAATCTGCCAATGTCTTGTATATTCC 181177
>seq5
Length=1485630
Score = 120 bits (132), Expect = 2e-22
Identities = 519/821 (63%), Gaps = 0/821 (0%)
Strand=Plus/Minus
Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067
|||||||| || | || || ||||| | || ||||||| | || || ||||||||
Sbjct 766718 GCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGGAGAAGAGTATTCAACAATTTCA 766659
Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127
||| | |||||| | ||| || | ||||| |||||| ||| ||| ||
Sbjct 766658 CAGCATAAATTACTTGATTTGATGACACCAAGATTCTTTTGATTGGACTTCTCATTACAA 766599
Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187
|| ||||| || | |||| | || || || ||| ||| | || | || | || |
Sbjct 766598 GCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGTTTGAGCTTCCAAAATAGAGTAC 766539
Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAG 66247
||||| | || ||||| || | ||| || || |||| ||||| || ||| ||
Sbjct 766538 CAAAGTTTTTGAGCTTTCACTGTTCTTACAGCTCTTCCTTCACGTTCATATCTTTCATAC 766479
Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307
| ||| || || ||| | || || | || |||| | | || | |
Sbjct 766478 AAAGCTTCAAATTCTTTACCGTAACAATCAGATAAACCTGGAGCTTCATTAGGTGAAAAG 766419
Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367
| ||||||||||| | || || | |||||||| |||| ||||| | |||
Sbjct 766418 AAAGACCAATCACCGCCAGCCTCAACTCTCTTCATAAATAAATCACTAATCCATAAGGCA 766359
Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427
|| | ||| | |||| || || | |||||||| || | || ||| | |||
Sbjct 766358 ACAAATAAATCTCTGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTCACGTCAATGAAA 766299
Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487
|||||||| || | |||||| ||||| | ||| | ||||| | || |||||
Sbjct 766298 TCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAAGCGAAAGCACCAGGGCGTTTATTA 766239
Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547
||||||||||| || || | ||| |||||||| ||||||| ||| || | | ||
Sbjct 766238 CCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAAACACGCATCATGGGGATAATACCA 766179
Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607
|||||| | || || || || | || || || || | |||| || | ||
Sbjct 766178 TTAGATGTTCCGTTAGTACCAGCAATATAAGAACCAGTTGATCTAATATTATGGATATGT 766119
Query 66608 AGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATG 66667
| |||||||||||| || ||||| || || ||||| | || | | |||
Sbjct 766118 AAACCAATACCACCAGCAGTCTTGGAAATCAATGCACATGTTTTAAGAGTATCGTAAATG 766059
Query 66668 CCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGT 66727
|| ||||| || || |||| |||| | | | | || ||| | ||| |||| |||
Sbjct 766058 CCTTCAATTGAATCTTCCTTCATGGCAACCAAGAAACAAGAAGACATTTGAGGTTGAGGT 765999
Query 66728 GTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTG 66787
|| | || || | || |||| || || || || || | |||||| ||||
Sbjct 765998 GTACCAGCATTAAACAAAGTAGGTGATGCATGAGTGAAATACTTCAAAGACATCAAATTA 765939
Query 66788 TACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828
|| || | ||| ||| |||||||| ||||||||||| ||
Sbjct 765938 TAAGTTTTGATAACATTATCAATGTCATCGCCATGAATACC 765898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567927319600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |