Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002094175.1_202017-04-
17] 79 sequences; 9,328,382 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq11 277 7e-72
>seq11
Length=177074
Score = 277 bits (306), Expect = 7e-72
Identities = 229/276 (83%), Gaps = 10/276 (4%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||||||||||||| ||| |||||| |||||||||||||||
Sbjct 115321 CCCGTCTTGAAACACGGACCAAGGAGTCTATTGTCTGCGCGAGTATTTGGGTGTCAAACC 115262
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527
| | ||| | |||||| ||| |||| |||| | |||| || |||| |||| |
Sbjct 115261 CATATGCGAAGTGAAAGCGAA---AGGTTCTAACC--TTCGGGTTCAGAATCGGCCGACC 115207
Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587
| | | | | | ||||||| |||| | | || |||||||||||||||||||||
Sbjct 115206 GT----TTATAGAAGCGGATTGAGTA-GAGCGTGGATGATGGGACCCGAAAGATGGTGAA 115152
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 115151 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGAC 115092
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||||||||||||||||||
Sbjct 115091 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 115056
Score = 183 bits (202), Expect = 1e-43
Identities = 136/158 (86%), Gaps = 1/158 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||||||||||||||||||||||||| ||||||| |||| | | |||||||||||||
Sbjct 115618 GAGTCGAGTTGTTTGGGAATGCAGCTC-AAATGGGTGGTATGCTCCATCTAAAGCTAAAT 115560
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| || |||||||||||| ||||||| |||| ||||||||||||| |||||| ||
Sbjct 115559 ATCTGCGAGAGACCGATAGTAAACAAGTACTGTGAGGGAAAGATGAAAAGAACTTTGAAA 115500
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
||||||| |||||| ||||||||||||||||| |||||
Sbjct 115499 AGAGAGTGAAAAAGTACGTGAAATTGTTGAAATGGAAG 115462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079998305450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |