Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq73 250 4e-64 seq79 237 2e-60 >seq73 Length=2528 Score = 250 bits (276), Expect = 4e-64 Identities = 196/229 (86%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| || ||||||||| |||||||||||||||| | Sbjct 1228 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGATGACTTGCGCTTACTAGGAATT-C 1171 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| |||| ||| |||||||| | |||||||||| ||||| | | ||| | |||||| Sbjct 1170 CTCGTTCAAGAGCAAAAATTGCAAAGCTCTATCCCCAGCACGACGCAGTTTAACAAGATT 1111 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| ||||| || ||||| || | | ||||||||||||||||||| Sbjct 1110 ACCCATTCCTTTCGGAAAAGGTT-TAAACTCGCTGGCTGCGTCAGTGTAGCGCGCGTGCG 1052 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||| ||| ||| Sbjct 1051 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCGAACCTCC 1003 >seq79 Length=2997 Score = 237 bits (262), Expect = 2e-60 Identities = 187/220 (85%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| | Sbjct 1249 GTACAAAGGGCAGGGACGTAGTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1192 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| || ||||| ||| || Sbjct 1191 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAAAGTTTCACAAGTTT 1132 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| | |||||||| | |||||||||||||||||| Sbjct 1131 ACCCAGTCATTTCGGACAAGGGGCACCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 1072 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||| ||||||||||||||||||||||||||||||||||| Sbjct 1071 GCCCGGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 1032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751997850925