Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq73 316 4e-84
seq79 289 5e-76
>seq73
Length=2528
Score = 316 bits (350), Expect = 4e-84
Identities = 221/246 (90%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGG 132
|||||| ||| |||||||||||||||||||||||| ||| ||||| |||| |||||||||
Sbjct 344 TTTACTGTGAGAAAATTAGAGTGTTCAAAGCAGGCGTTTCGCTCGTATACGTTAGCATGG 403
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192
||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||
Sbjct 404 AATAATAGAATAGGACGAG-GGTTCTATTTTGTTGGTT-CTAGGACCGTCGTAATGATTA 461
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
|||||||| |||||||| |||||||||| | || |||||||||||||||||||||| ||
Sbjct 462 ATAGGGATGGTCGGGGGCATCAGTATTCAGTAGTAAGAGGTGAAATTCTTGGATTTACTG 521
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|||||||||| ||||||||||||| ||||||| | ||||||||||| ||||||||||
Sbjct 522 AAGACTAACTGCTGCGAAAGCGTTTGCCAAGGACATCTTCATTAATCA-AGAACGAAAGT 580
Query 313 TAGGGG 318
||||||
Sbjct 581 TAGGGG 586
>seq79
Length=2997
Score = 289 bits (320), Expect = 5e-76
Identities = 220/257 (86%), Gaps = 2/257 (1%)
Strand=Plus/Plus
Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120
||| |||||||| ||||||||||||||||||||||||||||||||||| | | | |||||
Sbjct 340 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 399
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct 400 ATATTAGCATGGAATAACAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAACTG 459
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||||| ||||| || |||||| | |||||| | |||||||||||||
Sbjct 460 CCGTAATGATTAAAAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 519
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||| |||||| ||||||||||||| || ||||| ||||||||||||||||
Sbjct 520 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 579
Query 301 GTGAACGAAAGTTAGGG 317
||||||| |||||||
Sbjct 580 -AGAACGAAGGTTAGGG 595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915197300160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |