Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq79 293 4e-77 seq73 194 3e-47 >seq79 Length=2997 Score = 293 bits (324), Expect = 4e-77 Identities = 224/262 (85%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 1104 ACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAGA 1045 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCA-- 118 ||||||||||||| | ||||| || || | | || |||||||||||||| || Sbjct 1044 CCTGTTATTGCCTTTTGCCTCCATCACCTAGACGGTCGATTGTCCCTCTAAGAAGACATA 985 Query 119 -GCCACCAACCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | ||||| | | ||| | | ||||||||||||| ||||||||||||||||||||| Sbjct 984 AGGGGCCAACAAAATGTCAACCCGTCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGGA 925 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 865 Query 237 AAGAAAGAGCTATCAATCTGTC 258 | ||||| || ||||||||||| Sbjct 864 ATGAAAGCGCCATCAATCTGTC 843 >seq73 Length=2528 Score = 194 bits (214), Expect = 3e-47 Identities = 192/242 (79%), Gaps = 5/242 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1084 ACTCGCTGGCTGCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1025 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||| ||| ||| | | | || ||||||| ||||| |||| | Sbjct 1024 CCTGTTATTGCCTCGAACCTCCCCCGAATTGTCTCCGGTAGTCCCGCTAAG-AGCCGGAA 966 Query 122 ACCAACCATA-GT-CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| || | | || | | ||| | |||| || |||||||| ||||||||| ||| Sbjct 965 ACCCACAAAATGTGGGCTCCGGC-AACTAGC-GGCCGAGGTCTCGCTCGTTATCGCAATA 908 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||| | || ||| |||||||||||||||||||||||||||| | ||||| | Sbjct 907 AAGCAGACAACTTACGTCACGAACTAAGAACGGCCATGCACCACCACCCTTCTAATCATG 848 Query 240 AA 241 || Sbjct 847 AA 846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797722895