Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq73 203 3e-50 seq79 201 1e-49 >seq73 Length=2528 Score = 203 bits (224), Expect = 3e-50 Identities = 155/178 (87%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCATGG 71 |||||| ||| |||||||||| ||||||||||||| ||| ||||| |||| ||| ||||| Sbjct 344 TTTACTGTGAGAAAATTAGAGTGTTCAAAGCAGGCGTTTCGCTCGTATACGTTAGCATGG 403 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 ||||||||||||||||| | ||||||||||||| |||| ||||||||| | |||||||| Sbjct 404 AATAATAGAATAGGACGAG-GGTTCTATTTTGTTGGTT-CTAGGACCGTC-GTAATGATT 460 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 |||| |||| |||||||| |||||||||| | || | |||||||||||||||||||| Sbjct 461 AATAGGGATGGTCGGGGGCATCAGTATTCAGTAGTAAGAGGTGAAATTCTTGGATTTA 518 >seq79 Length=2997 Score = 201 bits (222), Expect = 1e-49 Identities = 159/188 (85%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAAT 59 |||||||||||| |||||||||||||||||||| |||||||||||||| | | | ||||| Sbjct 340 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 399 Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119 | |||| |||||||||| ||||||||||||||||||||||||||| ||||||||| || | Sbjct 400 ATATTAGCATGGAATAACAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAACTG 459 Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179 |||||||||| || | ||| || |||||| | |||||| | | |||||||||| Sbjct 460 -CCGTAATGATTAAAAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATT 518 Query 180 CTTGGATT 187 |||||||| Sbjct 519 CTTGGATT 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998536800