Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 277 1e-69
seq3 82.4 6e-11
>seq1
Length=2987201
Score = 277 bits (306), Expect = 1e-69
Identities = 643/962 (67%), Gaps = 12/962 (1%)
Strand=Plus/Minus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|| ||||| | ||| || |||||||| ||||| |||| ||||| | | |||||| |||
Sbjct 1207020 GGGAGGGCTACAGAGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACA 1206961
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|||||| |||| ||| || ||||| || | ||||| || || ||||||||
Sbjct 1206960 ATTTCGCAACACAAATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGG 1206901
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||| ||||||||||| | |||| | || | || ||||| || | ||||| ||
Sbjct 1206900 TTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATA 1206841
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCT----ACCTTTGCGTTCGTA 66237
|||| |||||| | ||||| | ||||| || ||||| | | || ||| ||
Sbjct 1206840 GCGTACCAAAGCTTCTGAGCCTTTATGGTACG-ACGGCCCTTTCCAGCCTT---TTCATA 1206785
Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297
| ||||| || || || || || | || || | || | || || | ||
Sbjct 1206784 CTTCTCGTAAAGAGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTT 1206725
Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357
|| ||||| || | ||||||| ||||| || || || ||| || ||||| || ||
Sbjct 1206724 GGGGCACATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAAT 1206665
Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417
||| ||||| ||| ||||||||||| || ||| || ||||||||||||||||||
Sbjct 1206664 CCAAAGGGCCATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAG 1206605
Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477
||||| || || || | ||| ||||||| || || ||||||||||| || | ||
Sbjct 1206604 GTCGATAAAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGG 1206545
Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537
||| ||| ||||||||||||||||| ||||| |||||| | ||||||||||| ||
Sbjct 1206544 ACGCTTGTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGG 1206485
Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597
| | ||| || || | || || || || | || || || || || || |
Sbjct 1206484 AAGAATCCCATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTT 1206425
Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657
|| ||| | || ||||| |||||||| | |||||||||| || || || ||
Sbjct 1206424 ATGCACACTGAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGT 1206365
Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717
| | || || ||||| || || |||| ||| | | |||| |||| || || | ||
Sbjct 1206364 ATCGTAAATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCTCATCTG 1206305
Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777
|| || || || | || | | | |||||| | ||||| || ||||| | | ||
Sbjct 1206304 AGGCTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGA 1206245
Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACA 66837
||| ||||| ||||| | ||| |||| ||||||||||| || | || | |
Sbjct 1206244 CATAAGGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACC-AATGGAGA 1206186
Query 66838 -TCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAG 66895
||||| | | | ||||| || ||| | | ||| || | | || ||||||
Sbjct 1206185 CGCGCATGATCATATGCTGAGGGCGCTCG-TGAACTTTTCCATTTAGTTTCAGCAAGTAG 1206127
Query 66896 GAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATG 66955
||||| || || || |||| |||||| || ||||||||| || | ||| ||||||
Sbjct 1206126 GAGCGCTCTAGCGTTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATG 1206067
Query 66956 GC 66957
||
Sbjct 1206066 GC 1206065
>seq3
Length=2072284
Score = 82.4 bits (90), Expect = 6e-11
Identities = 91/119 (76%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 66339 GCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAA 66398
|||| |||| ||||||||||| || || || || || |||||||| || | ||| ||
Sbjct 622052 GCATGAATAAGTCAGGTATCCATAGCGCATAAAATAGGTCGCGTGCCCGATACTCATCCT 622111
Query 66399 TGCCGTGATTTTTGCGCAAG-TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456
| ||||||||||| | ||| || | |||| |||| || || ||||||||||| || ||
Sbjct 622112 TTCCGTGATTTTT-CTTAAGATCTAAGAACCCAAAAATATCTGCATGCCATGGCTCTAG 622169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567922474240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |