Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2 389 7e-106 >seq2 Length=4956242 Score = 389 bits (430), Expect = 7e-106 Identities = 238/252 (94%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 4903924 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4903865 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 4903864 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4903805 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 4903804 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4903745 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| Sbjct 4903744 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4903686 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4903685 GAAAGTTAGGGG 4903674 Score = 389 bits (430), Expect = 7e-106 Identities = 238/252 (94%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 4912542 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4912483 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 4912482 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4912423 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 4912422 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4912363 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| Sbjct 4912362 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4912304 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4912303 GAAAGTTAGGGG 4912292 Score = 389 bits (430), Expect = 7e-106 Identities = 238/252 (94%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 4921158 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4921099 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 4921098 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4921039 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 4921038 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4920979 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| Sbjct 4920978 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4920920 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4920919 GAAAGTTAGGGG 4920908 Score = 389 bits (430), Expect = 7e-106 Identities = 238/252 (94%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 4947013 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4946954 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 4946953 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4946894 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 4946893 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4946834 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| Sbjct 4946833 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4946775 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4946774 GAAAGTTAGGGG 4946763 Score = 389 bits (430), Expect = 7e-106 Identities = 238/252 (94%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 4955629 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4955570 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 4955569 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4955510 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 4955509 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4955450 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| Sbjct 4955449 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4955391 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4955390 GAAAGTTAGGGG 4955379 Score = 379 bits (420), Expect = 4e-103 Identities = 237/252 (94%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 4929777 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4929718 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 4929717 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4929658 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 4929657 TGATTAATAGGGACAGTC-GGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4929599 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| Sbjct 4929598 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4929540 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4929539 GAAAGTTAGGGG 4929528 Score = 379 bits (420), Expect = 4e-103 Identities = 237/252 (94%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 4938394 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4938335 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 4938334 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4938275 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 4938274 TGATTAATAGGGACAGTC-GGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4938216 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| Sbjct 4938215 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4938157 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4938156 GAAAGTTAGGGG 4938145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199963392