Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq2 389 7e-106
>seq2
Length=4956242
Score = 389 bits (430), Expect = 7e-106
Identities = 238/252 (94%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 4903924 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4903865
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 4903864 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4903805
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4903804 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4903745
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||
Sbjct 4903744 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4903686
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 4903685 GAAAGTTAGGGG 4903674
Score = 389 bits (430), Expect = 7e-106
Identities = 238/252 (94%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 4912542 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4912483
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 4912482 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4912423
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4912422 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4912363
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||
Sbjct 4912362 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4912304
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 4912303 GAAAGTTAGGGG 4912292
Score = 389 bits (430), Expect = 7e-106
Identities = 238/252 (94%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 4921158 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4921099
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 4921098 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4921039
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4921038 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4920979
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||
Sbjct 4920978 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4920920
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 4920919 GAAAGTTAGGGG 4920908
Score = 389 bits (430), Expect = 7e-106
Identities = 238/252 (94%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 4947013 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4946954
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 4946953 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4946894
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4946893 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4946834
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||
Sbjct 4946833 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4946775
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 4946774 GAAAGTTAGGGG 4946763
Score = 389 bits (430), Expect = 7e-106
Identities = 238/252 (94%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 4955629 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4955570
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 4955569 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4955510
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4955509 TGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4955450
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||
Sbjct 4955449 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4955391
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 4955390 GAAAGTTAGGGG 4955379
Score = 379 bits (420), Expect = 4e-103
Identities = 237/252 (94%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 4929777 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4929718
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 4929717 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4929658
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 4929657 TGATTAATAGGGACAGTC-GGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4929599
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||
Sbjct 4929598 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4929540
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 4929539 GAAAGTTAGGGG 4929528
Score = 379 bits (420), Expect = 4e-103
Identities = 237/252 (94%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 4938394 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTCGCTCGAATATATTA 4938335
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 4938334 GCATGGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCGTCGTAA 4938275
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 4938274 TGATTAATAGGGACAGTC-GGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 4938216
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||
Sbjct 4938215 TTATTGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 4938157
Query 307 GAAAGTTAGGGG 318
||||||||||||
Sbjct 4938156 GAAAGTTAGGGG 4938145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199963392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |