Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2 232 1e-58
>seq2
Length=4956242
Score = 232 bits (256), Expect = 1e-58
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 4899387 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4899330
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4899329 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATACTA 4899270
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATA--GGCTTCGGCC-CC 176
||||| | ||||||| ||| |||||| ||| ||||| |||| | ||| ||| |
Sbjct 4899269 GAACGCGATGATTCTTGCCTCGCACATTTTAGATGGATAAAAATAAGGCCTTGTGCCGCT 4899210
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGG 234
||||| |||||||| || ||||| || | || ||| ||| | | || ||
Sbjct 4899209 GAACCATAGCAGGCTGGTAACGGCACTCAGTAGATAAATTATTGGGTGCTTA-CCGGTGG 4899151
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| | || |||||| |||||||||||||||||||||||
Sbjct 4899150 ATAGCAATGTTACTATGCGCGGGGATAAATCCTTTGCAGACGAC 4899107
Score = 232 bits (256), Expect = 1e-58
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 4908005 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4907948
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4907947 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATACTA 4907888
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATA--GGCTTCGGCC-CC 176
||||| | ||||||| ||| |||||| ||| ||||| |||| | ||| ||| |
Sbjct 4907887 GAACGCGATGATTCTTGCCTCGCACATTTTAGATGGATAAAAATAAGGCCTTGTGCCGCT 4907828
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGG 234
||||| |||||||| || ||||| || | || ||| ||| | | || ||
Sbjct 4907827 GAACCATAGCAGGCTGGTAACGGCACTCAGTAGATAAATTATTGGGTGCTTA-CCGGTGG 4907769
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| | || |||||| |||||||||||||||||||||||
Sbjct 4907768 ATAGCAATGTTACTATGCGCGGGGATAAATCCTTTGCAGACGAC 4907725
Score = 232 bits (256), Expect = 1e-58
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 4916623 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4916566
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4916565 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATACTA 4916506
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATA--GGCTTCGGCC-CC 176
||||| | ||||||| ||| |||||| ||| ||||| |||| | ||| ||| |
Sbjct 4916505 GAACGCGATGATTCTTGCCTCGCACATTTTAGATGGATAAAAATAAGGCCTTGTGCCGCT 4916446
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGG 234
||||| |||||||| || ||||| || | || ||| ||| | | || ||
Sbjct 4916445 GAACCATAGCAGGCTGGTAACGGCACTCAGTAGATAAATTATTGGGTGCTTA-CCGGTGG 4916387
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| | || |||||| |||||||||||||||||||||||
Sbjct 4916386 ATAGCAATGTTACTATGCGCGGGGATAAATCCTTTGCAGACGAC 4916343
Score = 232 bits (256), Expect = 1e-58
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 4925241 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4925184
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4925183 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATACTA 4925124
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATA--GGCTTCGGCC-CC 176
||||| | ||||||| ||| |||||| ||| ||||| |||| | ||| ||| |
Sbjct 4925123 GAACGCGATGATTCTTGCCTCGCACATTTTAGATGGATAAAAATAAGGCCTTGTGCCGCT 4925064
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGG 234
||||| |||||||| || ||||| || | || ||| ||| | | || ||
Sbjct 4925063 GAACCATAGCAGGCTGGTAACGGCACTCAGTAGATAAATTATTGGGTGCTTA-CCGGTGG 4925005
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| | || |||||| |||||||||||||||||||||||
Sbjct 4925004 ATAGCAATGTTACTATGCGCGGGGATAAATCCTTTGCAGACGAC 4924961
Score = 232 bits (256), Expect = 1e-58
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 4933859 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4933802
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4933801 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATACTA 4933742
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATA--GGCTTCGGCC-CC 176
||||| | ||||||| ||| |||||| ||| ||||| |||| | ||| ||| |
Sbjct 4933741 GAACGCGATGATTCTTGCCTCGCACATTTTAGATGGATAAAAATAAGGCCTTGTGCCGCT 4933682
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGG 234
||||| |||||||| || ||||| || | || ||| ||| | | || ||
Sbjct 4933681 GAACCATAGCAGGCTGGTAACGGCACTCAGTAGATAAATTATTGGGTGCTTA-CCGGTGG 4933623
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| | || |||||| |||||||||||||||||||||||
Sbjct 4933622 ATAGCAATGTTACTATGCGCGGGGATAAATCCTTTGCAGACGAC 4933579
Score = 232 bits (256), Expect = 1e-58
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 4942476 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4942419
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4942418 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATACTA 4942359
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATA--GGCTTCGGCC-CC 176
||||| | ||||||| ||| |||||| ||| ||||| |||| | ||| ||| |
Sbjct 4942358 GAACGCGATGATTCTTGCCTCGCACATTTTAGATGGATAAAAATAAGGCCTTGTGCCGCT 4942299
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGG 234
||||| |||||||| || ||||| || | || ||| ||| | | || ||
Sbjct 4942298 GAACCATAGCAGGCTGGTAACGGCACTCAGTAGATAAATTATTGGGTGCTTA-CCGGTGG 4942240
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| | || |||||| |||||||||||||||||||||||
Sbjct 4942239 ATAGCAATGTTACTATGCGCGGGGATAAATCCTTTGCAGACGAC 4942196
Score = 232 bits (256), Expect = 1e-58
Identities = 227/284 (80%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 4951094 GTACGAGAGGAACCGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4951037
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct 4951036 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATACTA 4950977
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATA--GGCTTCGGCC-CC 176
||||| | ||||||| ||| |||||| ||| ||||| |||| | ||| ||| |
Sbjct 4950976 GAACGCGATGATTCTTGCCTCGCACATTTTAGATGGATAAAAATAAGGCCTTGTGCCGCT 4950917
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGG 234
||||| |||||||| || ||||| || | || ||| ||| | | || ||
Sbjct 4950916 GAACCATAGCAGGCTGGTAACGGCACTCAGTAGATAAATTATTGGGTGCTTA-CCGGTGG 4950858
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| | || |||||| |||||||||||||||||||||||
Sbjct 4950857 ATAGCAATGTTACTATGCGCGGGGATAAATCCTTTGCAGACGAC 4950814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199968256
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