Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2 753 0.0 seq3 123 8e-26 >seq2 Length=4956242 Score = 753 bits (834), Expect = 0.0 Identities = 473/505 (94%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| Sbjct 4904145 GTTCTCATTCCAATTACAAGACCCAATGG-GCCCTGTATCGTTATTTATTGTCACTACCT 4904203 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4904204 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4904263 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct 4904264 TCTCAGGCTCCCTCTCCGGAATAGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 4904323 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4904324 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 4904383 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| |||||||||| |||||||||||||||||||| ||| ||||| | | ||||| Sbjct 4904384 CAAGGCTATGCGATTCGAAAAGTTATTATGAATCACCAAAGAG-TCCGAA-GACATTGGT 4904441 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA-GTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||| | || | ||| |||||||||||||||||||||| Sbjct 4904442 TTTTTATCTAATAAATACATCCCAACGAAACGAAGGGATTTTTAGCATGTATTAGCTCTA 4904501 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 4904502 GAATTACCACGGTTATCCAAGTAGTAATGTACTATCAAATAAACGATAACTGATTTAATG 4904561 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4904562 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 4904621 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4904622 GAGACAAGCATATGACTACTGGCAG 4904646 Score = 753 bits (834), Expect = 0.0 Identities = 473/505 (94%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| Sbjct 4912762 GTTCTCATTCCAATTACAAGACCCAATGG-GCCCTGTATCGTTATTTATTGTCACTACCT 4912820 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4912821 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4912880 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct 4912881 TCTCAGGCTCCCTCTCCGGAATAGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 4912940 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4912941 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 4913000 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| |||||||||| |||||||||||||||||||| ||| ||||| | | ||||| Sbjct 4913001 CAAGGCTATGCGATTCGAAAAGTTATTATGAATCACCAAAGAG-TCCGAA-GACATTGGT 4913058 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA-GTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||| | || | ||| |||||||||||||||||||||| Sbjct 4913059 TTTTTATCTAATAAATACATCCCAACGAAACGAAGGGATTTTTAGCATGTATTAGCTCTA 4913118 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 4913119 GAATTACCACGGTTATCCAAGTAGTAATGTACTATCAAATAAACGATAACTGATTTAATG 4913178 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4913179 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 4913238 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4913239 GAGACAAGCATATGACTACTGGCAG 4913263 Score = 753 bits (834), Expect = 0.0 Identities = 473/505 (94%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| Sbjct 4921379 GTTCTCATTCCAATTACAAGACCCAATGG-GCCCTGTATCGTTATTTATTGTCACTACCT 4921437 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4921438 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4921497 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct 4921498 TCTCAGGCTCCCTCTCCGGAATAGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 4921557 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4921558 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 4921617 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| |||||||||| |||||||||||||||||||| ||| ||||| | | ||||| Sbjct 4921618 CAAGGCTATGCGATTCGAAAAGTTATTATGAATCACCAAAGAG-TCCGAA-GACATTGGT 4921675 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA-GTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||| | || | ||| |||||||||||||||||||||| Sbjct 4921676 TTTTTATCTAATAAATACATCCCAACGAAACGAAGGGATTTTTAGCATGTATTAGCTCTA 4921735 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 4921736 GAATTACCACGGTTATCCAAGTAGTAATGTACTATCAAATAAACGATAACTGATTTAATG 4921795 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4921796 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 4921855 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4921856 GAGACAAGCATATGACTACTGGCAG 4921880 Score = 753 bits (834), Expect = 0.0 Identities = 473/505 (94%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| Sbjct 4929998 GTTCTCATTCCAATTACAAGACCCAATGG-GCCCTGTATCGTTATTTATTGTCACTACCT 4930056 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4930057 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4930116 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct 4930117 TCTCAGGCTCCCTCTCCGGAATAGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 4930176 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4930177 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 4930236 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| |||||||||| |||||||||||||||||||| ||| ||||| | | ||||| Sbjct 4930237 CAAGGCTATGCGATTCGAAAAGTTATTATGAATCACCAAAGAG-TCCGAA-GACATTGGT 4930294 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA-GTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||| | || | ||| |||||||||||||||||||||| Sbjct 4930295 TTTTTATCTAATAAATACATCCCAACGAAACGAAGGGATTTTTAGCATGTATTAGCTCTA 4930354 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 4930355 GAATTACCACGGTTATCCAAGTAGTAATGTACTATCAAATAAACGATAACTGATTTAATG 4930414 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4930415 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 4930474 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4930475 GAGACAAGCATATGACTACTGGCAG 4930499 Score = 753 bits (834), Expect = 0.0 Identities = 473/505 (94%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| Sbjct 4938615 GTTCTCATTCCAATTACAAGACCCAATGG-GCCCTGTATCGTTATTTATTGTCACTACCT 4938673 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4938674 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4938733 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct 4938734 TCTCAGGCTCCCTCTCCGGAATAGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 4938793 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4938794 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 4938853 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| |||||||||| |||||||||||||||||||| ||| ||||| | | ||||| Sbjct 4938854 CAAGGCTATGCGATTCGAAAAGTTATTATGAATCACCAAAGAG-TCCGAA-GACATTGGT 4938911 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA-GTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||| | || | ||| |||||||||||||||||||||| Sbjct 4938912 TTTTTATCTAATAAATACATCCCAACGAAACGAAGGGATTTTTAGCATGTATTAGCTCTA 4938971 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 4938972 GAATTACCACGGTTATCCAAGTAGTAATGTACTATCAAATAAACGATAACTGATTTAATG 4939031 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4939032 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 4939091 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4939092 GAGACAAGCATATGACTACTGGCAG 4939116 Score = 753 bits (834), Expect = 0.0 Identities = 473/505 (94%), Gaps = 4/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| Sbjct 4947234 GTTCTCATTCCAATTACAAGACCCAATGG-GCCCTGTATCGTTATTTATTGTCACTACCT 4947292 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4947293 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4947352 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct 4947353 TCTCAGGCTCCCTCTCCGGAATAGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 4947412 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4947413 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 4947472 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||| |||||||||| |||||||||||||||||||| ||| ||||| | | ||||| Sbjct 4947473 CAAGGCTATGCGATTCGAAAAGTTATTATGAATCACCAAAGAG-TCCGAA-GACATTGGT 4947530 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA-GTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||| | || | ||| |||||||||||||||||||||| Sbjct 4947531 TTTTTATCTAATAAATACATCCCAACGAAACGAAGGGATTTTTAGCATGTATTAGCTCTA 4947590 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 4947591 GAATTACCACGGTTATCCAAGTAGTAATGTACTATCAAATAAACGATAACTGATTTAATG 4947650 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4947651 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 4947710 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4947711 GAGACAAGCATATGACTACTGGCAG 4947735 Score = 531 bits (588), Expect = 2e-148 Identities = 363/400 (91%), Gaps = 8/400 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||||| | |||||||| |||||||||||||||||| Sbjct 4955849 GTTCTCATTCCAATTACAAGACCCAATGGG--CCTGTATCGTTATTTATTGTCACTACCT 4955906 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4955907 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4955966 Query 121 TCTCAGGCTCCCTCTCC-GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||| ||||| ||||||| ||| ||||||||||||||| |||||||| Sbjct 4955967 TCTCAGGCTCCCTCTCCGGGAATAGAACCCTTATT-CCCGTTACCCGTTGAAACCATGGT 4956025 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 4956026 AGGCCACTATCCTACCATCGAAAGTTGATA-GGCAGAAATTTGAATGAACCATCGCCAGC 4956084 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 |||||| |||||||||| |||||||||||||||||||| ||| ||||| | | |||| Sbjct 4956085 ACAAGGCTATGCGATTCGAAAAGTTATTATGAATCACCAAAGAG-TCCGAA-GACATTGG 4956142 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAA-GTCGGGGTTTTTAGCATGTATTAGCTCT 358 |||||||||||||||||||| ||| | || | ||| ||||||||||||||||||||| Sbjct 4956143 TTTTTTATCTAATAAATACATCCCAACGAAACGAAGGGATTTTTAGCATGTATTAGCTCT 4956202 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 |||||||||||||||||||| ||||||| ||||||||||| Sbjct 4956203 AGAATTACCACGGTTATCCAAGTAGTAATGTACTATCAAA 4956242 >seq3 Length=2773601 Score = 123 bits (136), Expect = 8e-26 Identities = 68/68 (100%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 437 CTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2772118 CTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 2772177 Query 497 ACTGGCAG 504 |||||||| Sbjct 2772178 ACTGGCAG 2772185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399939584