Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2 215 4e-51
seq1 96.9 3e-15
>seq2
Length=4956242
Score = 215 bits (238), Expect = 4e-51
Identities = 600/915 (66%), Gaps = 14/915 (2%)
Strand=Plus/Plus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
||||||| || | ||||| || ||| | || || ||||||| || |||| | |
Sbjct 3219401 ATGAACCTCTCCTTCAAGAAAACCCTAACAGATTTGTTCTGTTCCCTATTAAGTACCATG 3219460
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
| ||||||| |||||||| |||| || ||||| |||||||| | || || | ||||
Sbjct 3219461 AGATTTGGCAAATGTACAAGCAGGCTGAGGCTTCTTTCTGGACTGCTGAAGAAATTGATT 3219520
Query 61145 TGTCCAAAGACATGAATGACTGGGAGC---GT-TTATCGAGCGGTGAACAACATTTCATT 61200
| || ||||| | ||||||||||| || ||| || | ||| | ||| ||
Sbjct 3219521 TAGGAAAGGACATCAGTGACTGGGAGCACCGTCTTAATGAT-GATGAGAGATTTTTTATC 3219579
Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
| ||| | || |||||||| ||||| || ||||||||||| ||||| || | |||
Sbjct 3219580 TCTCGTGTCCTTGCATTCTTTGCTGCTTCAGATGGTATCGTCAACGAGAACTTGGTTGAA 3219639
Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| ||| | || || ||| | | ||||| ||||| ||||| ||||| |||
Sbjct 3219640 AGATTCTCTGGTGAAGTTCAAATTCCCGAGGCAAAGTGTTTTTACGGTTTCCAAATTATG 3219699
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
|||||||| |||| | |||| ||| | || || || || || |||| |||
Sbjct 3219700 ATGGAGAACATCCATGCAGAGACCTACTCATTACTTATTGACACTTATATCAAGGATGCT 3219759
Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440
||| | | |||||| |||| || || | || || | ||| ||| ||
Sbjct 3219760 AAGGAGGCTAACTTTTTGTTCCATGCTATTGACAATATTCCATGTATTAAGAAGAAGGCT 3219819
Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500
|| ||||| || ||||| | | | | || |||| ||| || | | ||
Sbjct 3219820 GACTGGGCTCTCCGATGGATTGCTGATGATCAGTCCACTTTTGCTGAGCGTCTCGTTGCC 3219879
Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560
||||| | || |||||| | || ||| |||||| |||||| ||||| |||||||||
Sbjct 3219880 TTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGATCATTTGCCAGTATCTTCTGGTTGAAG 3219939
Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620
|| |||||||| ||||| |||||||| ||| || || ||||| || || || || |||
Sbjct 3219940 AAGCGTGGACTCATGCCTGGTCTGACGTTCTCAAACGAATTGATCTCGCGTGATGAAGGC 3219999
Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680
||||| ||||||||| |||||| ||| || | || || || | | | ||
Sbjct 3220000 ATGCACACCGATTTTGCTTGTTTGCTTTTC---GGCCACCTTGTCAACAGAC---CTAAG 3220053
Query 61681 GAGCGTGTGGGTG---AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
|| ||| || ||||| | ||| || || | ||| ||| |||| || |||||
Sbjct 3220054 AAGTCTGTTATTGAAAAGATTATCACTGAAGCCGTTATTATTGAAAAGGAGTTCTTGACT 3220113
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
|| |||||||| || | || |||||| || |||| || || |||||
Sbjct 3220114 GATGCTTTGCCATGTAGTCTTTTGGGAATGAATGCCAAGCTTATGTGCCAATACATTGAG 3220173
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857
|||||||| ||| | | || | | |||| | | | |||||| | | |||
Sbjct 3220174 TTTGTTGCTGACAGATTATTACTTTCCCTTGGTAACAGTAAGGTATATAATGCTACCAAC 3220233
Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917
|| |||||||||||||| | || || || ||||||||| || || || ||||| |
Sbjct 3220234 CCCTTTGATTTCATGGAAAACATCTCATTGTCTGGCAAGACCAACTTCTTTGAGAAGAGA 3220293
Query 61918 GTAGGCGACTATCAA 61932
|| |||||||||
Sbjct 3220294 GTGTCTGACTATCAA 3220308
Score = 149 bits (164), Expect = 5e-31
Identities = 604/948 (64%), Gaps = 8/948 (1%)
Strand=Plus/Minus
Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073
||||| | || ||||| || | || ||||||| | ||||| |||||||| ||||
Sbjct 3633512 GATGCCAAATTACAGACGGCAACTTCTTCAGGAGAAGAGTACTCAACAATTTCACAGCAC 3633453
Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133
| || | | || || ||||| || ||||| |||||||||| ||| || ||||||
Sbjct 3633452 AAGTTGGAGGACTTGATAGTACCCAAGTTTTGTTGGTTACTCTTGCTATTACAAGCATCC 3633393
Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193
|| || | |||| | || | || |||||| ||| | || | || || | ||| ||
Sbjct 3633392 TTATAAAGCATGAATGGGTTACCAGTCTCAGTTTGAGCTTCGAGAATAGCATACCACAGC 3633333
Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252
| ||||| | || | | | ||| ||||||| ||||| | || || ||
Sbjct 3633332 TTTTGGGCCTTGATGGTTCTT-CTGCCTCTACCTTCCTTCTCGTACTTCTCATAAAGAGC 3633274
Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312
|||| ||||| | || || || | ||||||| | |||||||||| |
Sbjct 3633273 AACGAACTCGTCACCATAGACATCATCCAAGCCAGGACACTCATTGGGACACATCAAAGT 3633214
Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372
|||||| | | | || | ||| || | ||||| ||||| || || ||||
Sbjct 3633213 CCAATCCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAGAGCCAAGAA 3633154
Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432
| ||| | || || || || | |||||||| || |||| || | ||| |||||
Sbjct 3633153 CAAATCTCTGGCACGGACTTCTTCCTTACCGTGATTCTTTCGCAGCTCAATGAATTCAAA 3633094
Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492
| || ||||||| || |||| ||| ||||| || | || || || |||||
Sbjct 3633093 AACATCATCATGCCAAGGCTCCAAGTACATGGCAAAAGCACCTGGTCGCTTATTACCACC 3633034
Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552
|| || || || | ||| ||| ||||| || | |||||| || || | ||||| ||
Sbjct 3633033 CTGATCAACATATCTAGCAGTATTATTGAAAACTCTCAACATGGGAACAATACCGTTTGA 3632974
Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612
| || || || || | ||| ||| || || || |||| |||||| ||| |||
Sbjct 3632973 GGTACCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCACGGATATTATGAACACTCAAACC 3632914
Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTC 66672
||||||||| || | ||| || || |||||| || || | | ||||| ||
Sbjct 3632913 AATACCACCAGCAGACTTTGAAATCAAGGCACAAGTCTTCAAAGTATCGTAAATGCCATC 3632854
Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732
|| || || |||| ||| | | | | |||| || | ||| || ||||| || |
Sbjct 3632853 TATAGAATCGTCCTTCATGTTAACCAAGAAGCAAGAGGACATTTGAGGCTTGGGAGTACC 3632794
Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792
|| | | || ||||| | || || ||||| || | |||||||||| ||||| ||
Sbjct 3632793 AGCATTGTACAGAGTGGGGGAGGCATGTGTAAAATACTTTTGAGACATGTAGTTGTATGT 3632734
Query 66793 CTCGATGACAGCATCAATGTTTTC---GCCATGAATCCCGAGTGCACATCGCATCAGGAG 66849
|| ||| || | || | || |||||||| || | || || ||| | |
Sbjct 3632733 TTCAATG---GCCTTGGTGATATCAGAACCATGAATACCAACAGCTACTCTCATGATCAT 3632677
Query 66850 GTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909
|| ||| || | ||| | | | | || || | | ||||| || | ||||| ||
Sbjct 3632676 GTGTTGGGGTCTCTCGGCGATTTTACCATTAATCTTGAGCAAGTACGATCTTTCCAAAGT 3632617
Query 66910 CTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957
||||| ||| ||||| |||| |||||| | ||| || |||||
Sbjct 3632616 CTTGAAACCGAAGTAATTGTAAGAGAAATCACGATCATAAACAATGGC 3632569
Score = 104 bits (114), Expect = 2e-17
Identities = 241/356 (68%), Gaps = 8/356 (2%)
Strand=Plus/Minus
Query 65207 ATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATA 65266
|| ||||| || ||||| |||||||| | | ||||||| |||||||| ||||||||
Sbjct 3634307 ATGTTCAAAGATTGACTTTGATCGATAAAGGCAGCACGATCAGCAGCCATATCAATGATT 3634248
Query 65267 CGACGTCCC-GATATCTCCCAGACGGTCTTGTACAG-GCGACG-TA-CCTCAATTGGAAT 65322
| | || || | |||||| || ||||| |||| || | || ||||| || ||
Sbjct 3634247 -GTCTTCTGAGAAAGCTCCCAAACAGTCTTATACAATGCCTTGATATCCTCA---GGGAT 3634192
Query 65323 CTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGA 65382
| ||| | ||| | |||||| |||||||| | ||| ||| ||||
Sbjct 3634191 GTTAGGAATATTCTGAATAGAACCATTGTTGGCAATAATTCTATTCTTCATGTTCTCTCC 3634132
Query 65383 CCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGCC 65442
||||| |||||||||| ||| | | | ||| |||| | | |||||| || ||
Sbjct 3634131 CCACAGTCCCAAATCGACAAGGTCCTTCAACAACCATTGATTAACAATTTGGAATTCACC 3634072
Query 65443 GGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCC 65502
|| || || | ||| ||||||||||| ||| ||||| || |||| |||| ||
Sbjct 3634071 GGCAAGAACTCTACGAGAGTAGATGTTGGATGTGTAAGGTTCGAAACATTCGTTGTTACC 3634012
Query 65503 TAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCA 65558
|||||||| | || || ||||| ||||| ||||| || | | ||||||| ||
Sbjct 3634011 AAGAATTTGTGATGTTGAGGCAGTAGGCATAGGAGCAACGAGAAGGGAGTTTCTCA 3633956
>seq1
Length=5930846
Score = 96.9 bits (106), Expect = 3e-15
Identities = 319/491 (65%), Gaps = 4/491 (1%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || | |||||| ||||| || || || || | || || |||| | || || |
Sbjct 4967050 CATGAACAAATCAGGGATCCAAAGAGCATAAAACAAGTCTCGAGCTCTTAATTCTTCTTT 4967109
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
|||||||||||| || || || | ||||| || || || ||||| ||||||| |||
Sbjct 4967110 GCCGTGATTTTTTCGTAACTCTAAAAACTCTAATATATCACTGTGCCAAGGTTCCAAGTA 4967169
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
|| || || | || | |||| ||||| || || || || | || ||||||
Sbjct 4967170 AATAGCAAAAGCACCTGGTCTTTTGTTACCACCCTGATCTACATACCTGGCAGTATTGTT 4967229
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579
|| || | | |||||| || | || || || ||||||| | || | ||| |
Sbjct 4967230 AAAAACTCTTAGCATCGGCACAATTCCATTGGAGCTGCCATTACTCCCAGCAATGTAAGC 4967289
Query 66580 TCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGG 66638
|| ||| | ||| |||| |||| | |||||||| ||||| || || || |||||
Sbjct 4967290 ACC-CGTCGACCGGATATTATGAATGTGGAGACCAATCCCACCTGCAGTTTTTGAGATCA 4967348
Query 66639 CAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGA 66698
||| || || | || | | ||||| || ||||| || | || || | | |
Sbjct 4967349 TAGCGCAGTCTTTTAGGGTATCGTAAATGCCTTCTATGGAATCCTCTTTCATAGCTACCA 4967408
Query 66699 GGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGT 66758
| |||| || | ||| || || || ||| | | ||| || || |||| || |
Sbjct 4967409 AGAAGCAGGACGATAATTGAGGATTAGGCGTGCCAGAGTTGAATAGTGTTGGTGACGCAT 4967468
Query 66759 GCGTAAAGTAATGGCGAGACATGTAATTG-TACGTCTCGATGACAGCATCAATGTTTTCG 66817
| || || || | ||||| |||||| || ||||||||||| ||| || | | |
Sbjct 4967469 GGGTGAAATATTTTTCCGACAT-TAATTGATATGTCTCGATGACCCTATCTATATCTCTG 4967527
Query 66818 CCATGAATCCC 66828
|||||||| ||
Sbjct 4967528 CCATGAATACC 4967538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567980618560
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