Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq142 717 0.0 >seq142 Length=5093 Score = 717 bits (794), Expect = 0.0 Identities = 567/667 (85%), Gaps = 15/667 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 289 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 348 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 349 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 408 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 409 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 468 Query 203 GCAACCAGACTTGCCCG-CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 | || |||||||| | |||| | ||||| | | | || |||||||| ||| Sbjct 469 GAAATCAGACTTGGTAGGCAGT-GATCAACTATCTCTTGGGATTGTGCACTCG-CTGTTT 526 Query 262 TCAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 | || |||| ||| | | |||||| ||||| ||| || |||||||| | ||||| Sbjct 527 ACTGGGCCAGTATCGGTTTTGGCGGTGAGATAATGGCATTGG-AATGTGGCTC--TTCGG 583 Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGC 378 | |||||||||| | || || || | | |||| |||| |||||| | || Sbjct 584 AG--TGTTATAGCCTTTGTTGATATCA--CCAGTCGGGACCGAGGACCGCGCATTTTTGC 639 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||| ||||||||||| || ||||| ||||||||| ||||||||||||||||||||| Sbjct 640 TAGGATACTGGCGTAATGATTTTAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAA 699 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG-G 497 | ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| | Sbjct 700 CGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGAG 759 Query 498 GAACCCGTGAGGG-TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 | |||| |||| |||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 760 GGCCCCGCAAGGGGTGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGA 819 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 820 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 879 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 880 AACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATA 939 Query 677 GGGGCGA 683 ||||||| Sbjct 940 GGGGCGA 946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996439300