Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq142 717 0.0
>seq142
Length=5093
Score = 717 bits (794), Expect = 0.0
Identities = 567/667 (85%), Gaps = 15/667 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct 289 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 348
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 349 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 408
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 409 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 468
Query 203 GCAACCAGACTTGCCCG-CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
| || |||||||| | |||| | ||||| | | | || |||||||| |||
Sbjct 469 GAAATCAGACTTGGTAGGCAGT-GATCAACTATCTCTTGGGATTGTGCACTCG-CTGTTT 526
Query 262 TCAGG-CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
| || |||| ||| | | |||||| ||||| ||| || |||||||| | |||||
Sbjct 527 ACTGGGCCAGTATCGGTTTTGGCGGTGAGATAATGGCATTGG-AATGTGGCTC--TTCGG 583
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGC 378
| |||||||||| | || || || | | |||| |||| |||||| | ||
Sbjct 584 AG--TGTTATAGCCTTTGTTGATATCA--CCAGTCGGGACCGAGGACCGCGCATTTTTGC 639
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
|||||| ||||||||||| || ||||| ||||||||| |||||||||||||||||||||
Sbjct 640 TAGGATACTGGCGTAATGATTTTAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAA 699
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG-G 497
| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |
Sbjct 700 CGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGAG 759
Query 498 GAACCCGTGAGGG-TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556
| |||| |||| |||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 760 GGCCCCGCAAGGGGTGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGA 819
Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 820 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 879
Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 880 AACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATA 939
Query 677 GGGGCGA 683
|||||||
Sbjct 940 GGGGCGA 946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996439300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |