Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq142 800 0.0 >seq142 Length=5093 Score = 800 bits (886), Expect = 0.0 Identities = 503/538 (93%), Gaps = 6/538 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 2724 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 2665 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2664 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 2605 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| ||||||||||||| | |||| ||| || ||||| |||| ||||||| ||||| Sbjct 2604 AGCCC-CGAAGGACCTTAAATCTAGAACGTGGACGATGAAGTCCAGCTCCGCTTAATTGA 2546 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||| Sbjct 2545 ATAAGTAAAAAAACTATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 2489 Query 247 TTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||||| ||| | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 2488 TTCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 2430 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2429 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 2370 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2369 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 2310 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2309 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 2250 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2249 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 2192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197285568