Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq79 223 3e-53
seq78 214 1e-50
>seq79
Length=299291
Score = 223 bits (246), Expect = 3e-53
Identities = 620/947 (65%), Gaps = 18/947 (2%)
Strand=Plus/Minus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
||||||| | ||| || | ||| || ||||| | || ||||||| | |||||||||
Sbjct 119026 GGAAGGGACAAAGAAGCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGACA 118967
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119
||||| ||||| || | || | || || |||| || ||||||||||||||||
Sbjct 118966 ATTTCACAGCACAAGTTG--GAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGC 118909
Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179
|| || ||||||||||| | |||| | || | || |||||| ||||| ||||| ||
Sbjct 118908 TGTTACAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGA 118849
Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGT--- 66236
| || | ||| || | ||||| | || | | |||||||||| ||| |
Sbjct 118848 TAGCATACCAGAGCTTCTGAGCCTTGATAGTTCTT------CTACCTTTGCCTTCTTTTT 118795
Query 66237 ---AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293
| | ||| |||||| | || || || | || ||| || || |||||||
Sbjct 118794 CATACTTTTCATAGAGGGCAACAAATTCGTCTCCATAGACCTCGTCCAAACCAGGACACT 118735
Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353
| || ||||||| | |||||| | | | || | ||| || | || |
Sbjct 118734 CATTAGGGCACATCAAAGTCCAATCCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGG 118675
Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413
| ||||| ||||| |||| | ||| | || || || || | ||||| || || |
Sbjct 118674 GGATCCAAAGGGCCAAGAACAAATCTCTGGCACGGACTTCTTCCTTACCGTGGTTCTTTC 118615
Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473
||||||||| ||| ||||| | ||| | ||||| || |||| ||| |||||||| | |
Sbjct 118614 GCAAGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCAC 118555
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| | ||| ||||||||||| || || | ||| |||||||| || | |||||
Sbjct 118554 CTGGTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTTGTTGAAAACTCTCAACA 118495
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| || || | |||||||| | || || || ||| | || ||| || || || |
Sbjct 118494 TAGGGACAATACCGTTAGAAGTACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGA 118435
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCA 66653
||| ||| | | ||| |||||||||||| || | ||||||||| ||||| ||
Sbjct 118434 TATTGTGGATACTCAAACCAATACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCA 118375
Query 66654 CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAA 66713
|| | || || |||||||||||| |||| ||| | | | | | || || |
Sbjct 118374 AAGTATCATAGATACCCTCAATGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACA 118315
Query 66714 GTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGC 66773
||| || ||||| || | || | | | || || | ||| || |||||||| |
Sbjct 118314 TTTGTGGCTTGGGAGTACCAGCATTGTACAAAGTAGGAGAAGCATGAGTAAAGTACTTTT 118255
Query 66774 GAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG 66833
| |||||||||||||| || || ||| | |||||| ||||||| || || | |
Sbjct 118254 GTGACATGTAATTGTAAGTTTCAATGGCCTTGGCAATGTCCGCGCCATGGATACCAACAG 118195
Query 66834 CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAG 66892
| || ||| | | | |||||| | || | || ||| ||||| | | |||
Sbjct 118194 CTACTCTCATGATCATATGTTGAGGTCTCTC-AGCAATTTTTCCGTTGATCTTGAGCAAG 118136
Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
|| || | ||||| |||||||| ||| ||||| |||| ||||||
Sbjct 118135 TAAGATCTTTCCAAGGTCTTGAAACCGAAGTAGTTGTAAGAGAAATC 118089
>seq78
Length=1347436
Score = 214 bits (236), Expect = 1e-50
Identities = 594/900 (66%), Gaps = 22/900 (2%)
Strand=Plus/Minus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
||||||| || | || ||||| ||| | || || |||||||| ||| |||| | |
Sbjct 285165 ATGAACCTCTCCTTCAGGAGAACCCTAACAGATTTGTCTTGTTCCCTATCAAGTACCATG 285106
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
| || |||| |||||||| | || || || || |||||||| | || ||| | |||
Sbjct 285105 AGATCTGGCAAATGTACAAGCAAGCTGAGGCCTCTTTCTGGACTGCTGAAGAGATTGATC 285046
Query 61145 TGTCCAAAGACATGAATGACTGGGAGC---GT-TTATCGAGCGGTGAACAACATTTCATT 61200
| || || || | ||||||||| | || ||| || | ||| | || ||
Sbjct 285045 TTGGAAAGGATATTAGTGACTGGGAACACCGTCTTAATGAT-GATGAGAGATTCTTTATC 284987
Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
| |||| | || |||||||| || || || ||||| ||||||||||| | | ||
Sbjct 284986 TCTCGTGTGCTCGCTTTCTTTGCTGCCTCCGATGGTATTGTCAATGAGAACCTTGTTGAG 284927
Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| ||| | ||||| || | | ||||| ||||||||||| ||||| ||
Sbjct 284926 AGATTCTCTGGTGAGGTCCAGATTCCTGAGGCCAAGTGTTTCTACGGATTCCAAATCATG 284867
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
||||||||| |||| | |||| ||| | || || ||||| || |||| |||
Sbjct 284866 ATGGAGAATATCCATGCTGAGACTTACTCCTTACTTATTGATACTTATATCAAGGATGCT 284807
Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440
||| | | |||||| |||| || || | || || | ||| ||| ||
Sbjct 284806 AAGGAGGCTAACTTCTTGTTCCATGCTATTGATAACATTCCTTGTATTAAGAAGAAGGCT 284747
Query 61441 GATTGGGCCTTCAATTGGATCACCAGTA--CAACGGCTACATTTGGTGAACGATTGCTGG 61498
|| |||||| | | ||||||| | | ||| |||| |||| ||| || | | |
Sbjct 284746 GACTGGGCCCTAACTTGGATCTCTGATGATCAAT--CTACCTTTGCTGAGCGTCTCGTTG 284689
Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558
| || || | ||||||||| | || ||| ||| || ||||| |||||||||||||
Sbjct 284688 CTTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCATTTGCTAGTATCTTTTGGTTGA 284629
Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618
|||| ||||| |||||||| ||| |||| ||| ||||||||||| || || || || |
Sbjct 284628 AGAAGCGTGGTCTTATGCCTGGTTTGACTTTCTCTAATGAGTTGATTTCTCGTGATGAAG 284569
Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678
||||||| |||||| ||| |||||| || || | || || || | | |
Sbjct 284568 GCATGCACACTGATTTCGCTTGTTTGCTTTT---TGGCCACCTTGTCAACAGAC---CTA 284515
Query 61679 AGGAGCGTGTGGGTG---AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
|| || ||| | || ||||| || ||| || || ||| ||| ||||||| |||
Sbjct 284514 AGAAGTCTGTTGTTGAAAAGATTATTACTGAAGCTGTCGGTATTGAAAAGGAATTCTTGA 284455
Query 61736 CTGACGCTTTGCCCGTCTCACTCATC--GGCATGAATTGTGGACTAATGTCGCAGTATAT 61793
|||| || ||| || | | | || || || |||||| | || |||| || || ||
Sbjct 284454 CTGATGCCTTG-CCATGT-AGTCTTCTTGGAATGAATGCTAAGCTCATGTGTCAATACAT 284397
Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853
||| ||||| || ||| | | ||| | | || | || | |||| ||| | |
Sbjct 284396 TGAGTTTGTCGCTGACAGATTATTGCTTTCCCTTGGAAACAACAAGGTCTACAATGCTAC 284337
Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
|| || || ||||||||||| | || || || ||| ||||| ||||| ||||||||
Sbjct 284336 TAATCCCTTCGATTTCATGGAGAACATCTCTCTCTCTGGTAAGACTAATTTCTTCGAGAA 284277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567195670240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |