Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq8 161 8e-35
seq5 120 2e-22
>seq8
Length=940994
Score = 161 bits (178), Expect = 8e-35
Identities = 419/630 (67%), Gaps = 14/630 (2%)
Strand=Plus/Plus
Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073
|| || | ||| || || || |||| ||||| || | ||||| || ||||| |||
Sbjct 324527 GAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACAC 324586
Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133
| ||| | | || || ||||| |||| ||| || ||||| || || |||||
Sbjct 324587 AAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCT 324646
Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193
||||| | |||| | || || || ||||| ||| || || | ||| |||| ||| ||
Sbjct 324647 TTGTAAAGCATGAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGT 324706
Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTT-GCGTTCGTAATGTTCGTAGAGGT 66251
| || || | || | | | || | ||||| ||| ||||| |||| || | |
Sbjct 324707 TTTTGAGCTTTGATAGT-CTTTCTACCACGACCTTCAGCGA-CGTAACGTTCATATAAGG 324764
Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA----CACTTGTGTGGACACATC 66307
||| || ||||| | || || |||| || |||| |||||| || | | |
Sbjct 324765 CTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTTG----GAGAGAAC 324820
Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367
| | ||| ||||||| || || ||||| ||| || | ||| || |||||||||||
Sbjct 324821 AAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCT 324880
Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427
||| | ||| | ||| || ||| || | ||||| || || || | || | |||
Sbjct 324881 GGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAA 324940
Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487
||||||||||| || ||||||||||||| ||| | ||||| | || | ||||
Sbjct 324941 TCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTA 325000
Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547
|||||||| || || || ||||| |||||||||||||| | ||| || | | ||||
Sbjct 325001 CCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCG 325060
Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATT 66606
|| || | || || || || | || || || ||| | || || | ||| | |
Sbjct 325061 TTCGAAGTACCGTTAGTACCTGCAATATATGAACC-CGTAGAACGAATGTTGTGTATGTG 325119
Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGAT 66636
|| |||||||||||| || ||||| || ||
Sbjct 325120 CAAACCAATACCACCAGCGGTCTTAGAAAT 325149
>seq5
Length=1457367
Score = 120 bits (132), Expect = 2e-22
Identities = 408/624 (65%), Gaps = 19/624 (3%)
Strand=Plus/Minus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
||||||| ||| | ||||| ||| | || || | ||||| ||| | || | |
Sbjct 1119716 ATGAACCTCTACTAGTGGAGAACAAACGTAGATTTGTTCTATTCCCAATCAAATACCATG 1119657
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
| ||||||| ||| || | || || ||||| |||||||||| || ||| | |||
Sbjct 1119656 AGATTTGGCAAGCGTATAAGAGAGCAGAGGCTTCGTTCTGGACGGCCGAAGAGATTGATC 1119597
Query 61145 TGTCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATT 61200
| || || || || |||| ||| | ||| | | ||| ||| | ||||||
Sbjct 1119596 TATCGAAGGATATTCATGATTGGAATAACCGTATGAATGAGAAC-GAAAGATTTTTCATC 1119538
Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
| ||| ||||| |||||||| || || || ||||| || |||||||||||| | ||
Sbjct 1119537 TCCCGTGTCTTGGCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAG 1119478
Query 61261 CGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319
|||| | |||| || ||||| | | || || ||||| || || ||||| ||
Sbjct 1119477 AATTTCAGTGCAGAAG-TGCAAATTCCAGAAGCTAAATGTTTTTATGGTTTCCAAATCAT 1119419
Query 61320 CATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAG 61377
||||| || | ||||| |||| || | |||| || ||||| || |||| |||
Sbjct 1119418 GATGGAAAACATTCACTCAGAGACCTATTCCCTGTTA--ATTGATACTTATATCAAGGAT 1119361
Query 61378 CGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA 61437
| |||| | || ||||||||||| ||||| | || || | | || |||
Sbjct 1119360 CCAAAGGAAAGCGATTTCTTGTTCAATGCGATCGAAAACATTCCTCAGATTAAAGAGAAG 1119301
Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGC 61495
|| || ||||| ||| ||||| ||| ||| | ||| || | || |||||
Sbjct 1119300 GCCGAATGGGCTATCAGATGGAT--TCAGGACAGTGAATCTATCTTCGCAGAGAGATTGG 1119243
Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTAT--TTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| || ||||| | | || ||| | | |||||| || || ||||| || ||||| ||
Sbjct 1119242 TTGCTTTTGCTGCCATTGAAGGTATTTTCTTTTCA--GGTTCCTTTGCTGCTATCTTCTG 1119185
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
||||||||| || || ||||| ||||| || || || || ||||| | | ||
Sbjct 1119184 GTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGA 1119125
Query 61614 CGAGGGCATGCATTGTGATTTTGC 61637
|| || | ||| ||||||||
Sbjct 1119124 TGAAGGTTTACATACCGATTTTGC 1119101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567961237120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |