Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8 161 8e-35 seq5 120 2e-22 >seq8 Length=940994 Score = 161 bits (178), Expect = 8e-35 Identities = 419/630 (67%), Gaps = 14/630 (2%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || | ||| || || || |||| ||||| || | ||||| || ||||| ||| Sbjct 324527 GAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACAC 324586 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 | ||| | | || || ||||| |||| ||| || ||||| || || ||||| Sbjct 324587 AAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCT 324646 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||| | |||| | || || || ||||| ||| || || | ||| |||| ||| || Sbjct 324647 TTGTAAAGCATGAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGT 324706 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTT-GCGTTCGTAATGTTCGTAGAGGT 66251 | || || | || | | | || | ||||| ||| ||||| |||| || | | Sbjct 324707 TTTTGAGCTTTGATAGT-CTTTCTACCACGACCTTCAGCGA-CGTAACGTTCATATAAGG 324764 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA----CACTTGTGTGGACACATC 66307 ||| || ||||| | || || |||| || |||| |||||| || | | | Sbjct 324765 CTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTTG----GAGAGAAC 324820 Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367 | | ||| ||||||| || || ||||| ||| || | ||| || ||||||||||| Sbjct 324821 AAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCT 324880 Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 ||| | ||| | ||| || ||| || | ||||| || || || | || | ||| Sbjct 324881 GGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAA 324940 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 ||||||||||| || ||||||||||||| ||| | ||||| | || | |||| Sbjct 324941 TCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTA 325000 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 |||||||| || || || ||||| |||||||||||||| | ||| || | | |||| Sbjct 325001 CCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCG 325060 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATT 66606 || || | || || || || | || || || ||| | || || | ||| | | Sbjct 325061 TTCGAAGTACCGTTAGTACCTGCAATATATGAACC-CGTAGAACGAATGTTGTGTATGTG 325119 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGAT 66636 || |||||||||||| || ||||| || || Sbjct 325120 CAAACCAATACCACCAGCGGTCTTAGAAAT 325149 >seq5 Length=1457367 Score = 120 bits (132), Expect = 2e-22 Identities = 408/624 (65%), Gaps = 19/624 (3%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| ||| | ||||| ||| | || || | ||||| ||| | || | | Sbjct 1119716 ATGAACCTCTACTAGTGGAGAACAAACGTAGATTTGTTCTATTCCCAATCAAATACCATG 1119657 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 | ||||||| ||| || | || || ||||| |||||||||| || ||| | ||| Sbjct 1119656 AGATTTGGCAAGCGTATAAGAGAGCAGAGGCTTCGTTCTGGACGGCCGAAGAGATTGATC 1119597 Query 61145 TGTCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATT 61200 | || || || || |||| ||| | ||| | | ||| ||| | |||||| Sbjct 1119596 TATCGAAGGATATTCATGATTGGAATAACCGTATGAATGAGAAC-GAAAGATTTTTCATC 1119538 Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 | ||| ||||| |||||||| || || || ||||| || |||||||||||| | || Sbjct 1119537 TCCCGTGTCTTGGCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAG 1119478 Query 61261 CGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 |||| | |||| || ||||| | | || || ||||| || || ||||| || Sbjct 1119477 AATTTCAGTGCAGAAG-TGCAAATTCCAGAAGCTAAATGTTTTTATGGTTTCCAAATCAT 1119419 Query 61320 CATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCTCATCGATACGTACATCAGGGAG 61377 ||||| || | ||||| |||| || | |||| || ||||| || |||| ||| Sbjct 1119418 GATGGAAAACATTCACTCAGAGACCTATTCCCTGTTA--ATTGATACTTATATCAAGGAT 1119361 Query 61378 CGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA 61437 | |||| | || ||||||||||| ||||| | || || | | || ||| Sbjct 1119360 CCAAAGGAAAGCGATTTCTTGTTCAATGCGATCGAAAACATTCCTCAGATTAAAGAGAAG 1119301 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGC 61495 || || ||||| ||| ||||| ||| ||| | ||| || | || ||||| Sbjct 1119300 GCCGAATGGGCTATCAGATGGAT--TCAGGACAGTGAATCTATCTTCGCAGAGAGATTGG 1119243 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTAT--TTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | | || ||| | | |||||| || || ||||| || ||||| || Sbjct 1119242 TTGCTTTTGCTGCCATTGAAGGTATTTTCTTTTCA--GGTTCCTTTGCTGCTATCTTCTG 1119185 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 ||||||||| || || ||||| ||||| || || || || ||||| | | || Sbjct 1119184 GTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGA 1119125 Query 61614 CGAGGGCATGCATTGTGATTTTGC 61637 || || | ||| |||||||| Sbjct 1119124 TGAAGGTTTACATACCGATTTTGC 1119101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567961237120